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The dynamic of complex ordering systems with active rotational degrees of freedom exemplified by protein self-assembly is explored using a machine learning workflow that combines deep learning-based semantic segmentation and rotationally…

Soft Condensed Matter · Physics 2021-04-26 Sergei V. Kalinin , Shuai Zhang , Mani Valleti , Harley Pyles , David Baker , James J. De Yoreo , Maxim Ziatdinov

Collective dynamics in proliferating anisotropic particle systems arise from an interplay between growth, division, and mechanical interactions, often mediated by particle shape. In classical models of prolate, rod-like growth, flow-induced…

Soft Condensed Matter · Physics 2025-12-02 Jonas Isensee , Lukas Hupe , Philip Bittihn

Model matter agglomerations, with temperature as leading control parameter, have been considered, and some of their characteristics have been studied. The primary interest has been focused on the grain volume fluctuations, the magnitude of…

Soft Condensed Matter · Physics 2012-10-03 A. Gadomski , J. M. Rubi , J. Luczka , M. Ausloos

We present an experimental study of the compaction dynamics for two-dimensional anisotropic granular systems. Compaction dynamics is measured at three different scales : (i) the macroscopic scale through the packing fraction $\rho$, (ii)…

Disordered Systems and Neural Networks · Physics 2009-11-11 G. Lumay , N. Vandewalle

The grain size distribution (GSD) plays an important role in the mechanical properties of amorphous disordered systems and complex granular materials. Varying GSD causes segregation issues and alters critical behaviors. This work used the…

Soft Condensed Matter · Physics 2025-10-17 Teng Man , Yimin Lu , Zhongrong Wang , Herbert Huppert , Alessio Zaccone , Honglei Sun

We address a three-dimensional, coarse-grained description of dislocation networks at grain boundaries between rotated crystals. The so-called amplitude expansion of the phase-field crystal model is exploited with the aid of finite element…

Materials Science · Physics 2018-05-31 Marco Salvalaglio , Rainer Backofen , K. R. Elder , Axel Voigt

Controlling segregation is both a practical and a theoretical challenge. In this Letter we demonstrate a manner in which rotation-induced segregation may be controlled by altering the geometry of the rotating containers in which granular…

Soft Condensed Matter · Physics 2014-10-24 S. Gonzalez , C. R. K. Windows-Yule , S. Luding , D. J. Parker , A. R. Thornton

Using linearized elasticity as a convenient mechanical framework, we show that volumetric growth can be formulated as an optimization-driven process in which the growth tensor is determined implicitly by constrained optimization rather than…

Mathematical Physics · Physics 2026-05-14 Rohan Abeyaratne , Roberto Paroni , Marco Picchi Scardaoni

We study self-organization in a minimally nonlinear model of large random ecosystems. Populations evolve over time according to a piecewise linear system of ordinary differential equations subject to a non-negativity constraint resulting in…

Adaptation and Self-Organizing Systems · Physics 2026-01-05 Frederik J. Thomsen , Johan L. A. Dubbeldam , Rudolf Hanel

We study the dynamical properties of the ordered phases obtained in a coupled nonequilibrium system describing advection of two species of particles by a stochastically evolving landscape. The local dynamics of the landscape also gets…

Statistical Mechanics · Physics 2017-08-23 Shauri Chakraborty , Sakuntala Chatterjee , Mustansir Barma

Granular material in a swirled container exhibits a curious transition as the number of particles is increased: at low densities the particle cluster rotates in the same direction as the swirling motion of the container, while at high…

Soft Condensed Matter · Physics 2019-07-17 Lisa Lee , John Paul Ryan , Yoav Lahini , Miranda Holmes-Cerfon , Shmuel M. Rubinstein

Grain structure plays a key role in the mechanical properties of alloy materials. Engineering the grain structure requires a comprehensive understanding of the evolution of grain boundaries (GBs) when a material is subjected to various…

Materials Science · Physics 2021-10-26 Junyan He , Nikhil Chandra Admal

We describe the shear flow of a disordered granular material in the presence of grain fracture using the shear-transformation-zone (STZ) theory of amorphous plasticity adapted to systems with a hard-core inter-particle interaction. To this…

Soft Condensed Matter · Physics 2014-05-07 Charles K. C. Lieou , Ahmed E. Elbanna , Jean M. Carlson

This is the first paper about the fragmentation and mass outflow in the molecular cloud by using three-dimensional MHD nested-grid simulations. The binary star formation process is studied paying particular attention to the fragmentation of…

Astrophysics · Physics 2009-11-10 Masahiro N Machida , Kohji Tomisaka , Tomoaki Matsumoto

We consider a model of fragmentation of sheet by cracks that move with a velocity in preferred direction, but undergo random transverse displacements as they move. There is a non-zero probability of crack-splitting, and the split cracks…

Statistical Mechanics · Physics 2015-06-23 Deepak Dhar

We performed a series of numerical vertical compression tests on assemblies of 2D granular material using a Discrete Element code and studied the results with regard to the grain shape. The samples consist of 5,000 grains made from either 3…

Soft Condensed Matter · Physics 2012-08-03 K. Szarf , G. Combe , P. Villard

In this work, we investigate a fractional-order tumor growth model aimed at capturing memory effects and nonlocal temporal dynamics inherent to tumor evolution. The model is formulated using Caputo fractional derivatives and incorporates…

Medical Physics · Physics 2026-03-17 Karen Escutia , Carlos Islas , Pablo Padilla

Fluctuations of the local volume fraction within granular materials have previously been observed to decrease as the system approaches jamming. We experimentally examine the role of boundary conditions and inter-particle friction $\mu$ on…

Soft Condensed Matter · Physics 2015-05-19 James G. Puckett , Frederic Lechenault , Karen E. Daniels

We investigate equal spheres packings generated from several experiments and from a large number of different numerical simulations. The structural organization of these disordered packings is studied in terms of the network of common…

Statistical Mechanics · Physics 2008-06-26 T. Aste , T. Di Matteo

The large time and length scales and, not least, the vast number of particles involved in industrial-scale simulations inflate the computational costs of the Discrete Element Method (DEM) excessively. Coarse grain models can help to lower…

Computational Physics · Physics 2017-05-11 Daniel Queteschiner , Thomas Lichtenegger , Simon Schneiderbauer , Stefan Pirker