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The explosion of data available in life sciences is fueling an increasing demand for expressive models and computational methods. Graph transformation is a model for dynamic systems with a large variety of applications. We introduce a novel…

Wind turbine wake modelling is of crucial importance to accurate resource assessment, to layout optimisation, and to the operational control of wind farms. This work proposes a surrogate model for the representation of wind turbine wakes…

Machine Learning · Computer Science 2023-03-24 Siyi Li , Mingrui Zhang , Matthew D. Piggott

Machine learning on graphs is an important and ubiquitous task with applications ranging from drug design to friendship recommendation in social networks. The primary challenge in this domain is finding a way to represent, or encode, graph…

Social and Information Networks · Computer Science 2018-04-11 William L. Hamilton , Rex Ying , Jure Leskovec

Graph classification is a fundamental but challenging issue for numerous real-world applications. Despite recent great progress in image/video classification, convolutional neural networks (CNNs) cannot yet cater to graphs well because of…

Social and Information Networks · Computer Science 2020-01-13 Jiatao Jiang , Chunyan Xu , Zhen Cui , Tong Zhang , Wenming Zheng , Jian Yang

Graph representation learning (also called graph embeddings) is a popular technique for incorporating network structure into machine learning models. Unsupervised graph embedding methods aim to capture graph structure by learning a…

Social and Information Networks · Computer Science 2022-01-24 Andrew Stolman , Caleb Levy , C. Seshadhri , Aneesh Sharma

Graph embedding has become an increasingly important technique for analyzing graph-structured data. By representing nodes in a graph as vectors in a low-dimensional space, graph embedding enables efficient graph processing and analysis…

Machine Learning · Computer Science 2023-09-13 Hamidreza Lotfalizadeh , Mohammad Al Hasan

Representation learning of static and more recently dynamically evolving graphs has gained noticeable attention. Existing approaches for modelling graph dynamics focus extensively on the evolution of individual nodes independently of the…

Machine Learning · Computer Science 2021-05-12 Simeon Spasov , Alessandro Di Stefano , Pietro Lio , Jian Tang

Scene graph generation is a structured prediction task aiming to explicitly model objects and their relationships via constructing a visually-grounded scene graph for an input image. Currently, the message passing neural network based mean…

Computer Vision and Pattern Recognition · Computer Science 2022-05-17 Daqi Liu , Miroslaw Bober , Josef Kittler

Neural networks have been shown to be an effective tool for learning algorithms over graph-structured data. However, graph representation techniques---that convert graphs to real-valued vectors for use with neural networks---are still in…

Machine Learning · Computer Science 2018-10-10 Shaileshh Bojja Venkatakrishnan , Mohammad Alizadeh , Pramod Viswanath

Random walk sampling methods have been widely used in graph sampling in recent years, while it has bias towards higher degree nodes in the sample. To overcome this deficiency, classical methods such as MHRW design weighted walking by…

Methodology · Statistics 2022-09-27 Xiao Qi

Network embedding aims to represent a network into a low dimensional space where the network structural information and inherent properties are maximumly preserved. Random walk based network embedding methods such as DeepWalk and node2vec…

Social and Information Networks · Computer Science 2021-04-01 Jiawei Shen , Xincheng Shu , Hu Yang

The field of Graph Signal Processing (GSP) has proposed tools to generalize harmonic analysis to complex domains represented through graphs. Among these tools are translations, which are required to define many others. Most works propose to…

Signal Processing · Electrical Eng. & Systems 2022-01-12 Raphael Baena , Lucas Drumetz , Vincent Gripon

Spectral-based graph neural networks (SGNNs) have been attracting increasing attention in graph representation learning. However, existing SGNNs are limited in implementing graph filters with rigid transforms (e.g., graph Fourier or…

Machine Learning · Computer Science 2022-01-05 Mingxing Xu , Wenrui Dai , Chenglin Li , Junni Zou , Hongkai Xiong , Pascal Frossard

In this paper we introduce TWIG (Topologically-Weighted Intelligence Generation), a novel, embedding-free paradigm for simulating the output of KGEs that uses a tiny fraction of the parameters. TWIG learns weights from inputs that consist…

Artificial Intelligence · Computer Science 2024-02-12 Jeffrey Sardina , John D. Kelleher , Declan O'Sullivan

Random walk centrality is a fundamental metric in graph mining for quantifying node importance and influence, defined as the weighted average of hitting times to a node from all other nodes. Despite its ability to capture rich graph…

Artificial Intelligence · Computer Science 2025-10-24 Changan Liu , Zixuan Xie , Ahad N. Zehmakan , Zhongzhi Zhang

Graphons are continuous models that represent the structure of graphs and allow the generation of graphs of varying sizes. We propose Scalable Implicit Graphon Learning (SIGL), a scalable method that combines implicit neural representations…

Machine Learning · Statistics 2025-05-23 Ali Azizpour , Nicolas Zilberstein , Santiago Segarra

The recent contrastive learning methods, due to their effectiveness in representation learning, have been widely applied to modeling graph data. Random perturbation is widely used to build contrastive views for graph data, which however,…

Machine Learning · Computer Science 2023-07-04 Yucheng Shi , Kaixiong Zhou , Ninghao Liu

The goal of graph representation learning is to embed each vertex in a graph into a low-dimensional vector space. Existing graph representation learning methods can be classified into two categories: generative models that learn the…

Machine Learning · Computer Science 2017-11-23 Hongwei Wang , Jia Wang , Jialin Wang , Miao Zhao , Weinan Zhang , Fuzheng Zhang , Xing Xie , Minyi Guo

Random walks are a primary means for extracting information from large-scale graphs. While most real-world graphs are inherently dynamic, state-of-the-art random walk engines failed to efficiently support such a critical use case. This…

Distributed, Parallel, and Cluster Computing · Computer Science 2025-04-15 Pinhuan Wang , Chengying Huan , Zhibin Wang , Chen Tian , Yuede Ji , Hang Liu

A current goal in the graph neural network literature is to enable transformers to operate on graph-structured data, given their success on language and vision tasks. Since the transformer's original sinusoidal positional encodings (PEs)…

Machine Learning · Computer Science 2023-04-11 Patrick Soga , David Chiang