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Large language models (LLMs) show strong multilingual capabilities, yet reliably controlling the language of their outputs remains difficult. Representation-level steering addresses this by adding language-specific vectors to model…

Computation and Language · Computer Science 2026-04-07 Sing Hieng Wong , Hassan Sajjad , A. B. Siddique

Previous studies primarily utilize MLP neurons as units of analysis for understanding the mechanisms of factual knowledge in Language Models (LMs); however, neurons suffer from polysemanticity, leading to limited knowledge expression and…

Computation and Language · Computer Science 2025-02-28 Yuheng Chen , Pengfei Cao , Kang Liu , Jun Zhao

This work presents StrAE: a Structured Autoencoder framework that through strict adherence to explicit structure, and use of a novel contrastive objective over tree-structured representations, enables effective learning of multi-level…

Computation and Language · Computer Science 2025-02-25 Mattia Opper , Victor Prokhorov , N. Siddharth

Sparse autoencoders (SAEs) are a promising approach for uncovering interpretable features in large language models (LLMs). While several automated evaluation methods exist for SAEs, most rely on external LLMs. In this work, we introduce…

Computation and Language · Computer Science 2025-09-30 Alex Gulko , Yusen Peng , Sachin Kumar

Steering has emerged as a promising approach in controlling large language models (LLMs) without modifying model parameters. However, most existing steering methods rely on large-scale datasets to learn clear behavioral information, which…

Machine Learning · Computer Science 2025-10-06 Anyi Wang , Xuansheng Wu , Dong Shu , Yunpu Ma , Ninghao Liu

Predicting protein function from amino acid sequence remains a central challenge in data-scarce (low-$N$) regimes, limiting machine learning-guided protein design when only small amounts of assay-labeled sequence-function data are…

Machine Learning · Computer Science 2025-08-27 Darin Tsui , Kunal Talreja , Amirali Aghazadeh

Sparse autoencoders (SAEs) are increasingly used for safety-relevant applications including alignment detection and model steering. These use cases require SAE latents to be as atomic as possible. Each latent should represent a single…

Machine Learning · Computer Science 2026-04-07 Matthew Levinson

Traditional language models, adept at next-token prediction in text sequences, often struggle with transduction tasks between distinct symbolic systems, particularly when parallel data is scarce. Addressing this issue, we introduce…

Machine Learning · Computer Science 2024-02-19 Mohammad Hossein Amani , Nicolas Mario Baldwin , Amin Mansouri , Martin Josifoski , Maxime Peyrard , Robert West

Sparse autoencoders (SAEs) operationalise the linear representation hypothesis: they reconstruct model activations as sparse linear combinations of interpretable dictionary atoms, on the implicit assumption that activation space is well…

Machine Learning · Computer Science 2026-05-12 Eslam Zaher , Maciej Trzaskowski , Quan Nguyen , Fred Roosta

Low-Rank Adaptation (LoRA) has emerged as a widely adopted approach for adapting large language models, yet the internal representational changes induced by LoRA fine-tuning remain insufficiently understood. In this work, we investigate the…

Machine Learning · Computer Science 2026-05-29 Prasanth K K

Sparse Autoencoders (SAEs) have shown to find interpretable features in neural networks from polysemantic neurons caused by superposition. Previous work has shown SAEs are an effective tool to extract interpretable features from the early…

Computer Vision and Pattern Recognition · Computer Science 2025-04-17 Matthew Bozoukov

The Linear Representation Hypothesis asserts that the embeddings learned by neural networks can be understood as linear combinations of features corresponding to high-level concepts. Based on this ansatz, sparse autoencoders (SAEs) have…

Machine Learning · Computer Science 2026-01-29 Chiraag Kaushik , Davis Barch , Andrea Fanelli

Accurate understanding of anatomical structures is essential for reliably staging certain dental diseases. A way of introducing this within semantic segmentation models is by utilising hierarchy-aware methodologies. However, existing…

Computer Vision and Pattern Recognition · Computer Science 2026-02-20 Ryan Banks , Camila Lindoni Azevedo , Hongying Tang , Yunpeng Li

Large language models (LLMs) encode a diverse range of linguistic features within their latent representations, which can be harnessed to steer their output toward specific target characteristics. In this paper, we modify the internal…

Computation and Language · Computer Science 2025-02-27 Sumanta Bhattacharyya , Pedram Rooshenas

Recent work on sparse autoencoders (SAEs) has shown promise in extracting interpretable features from neural networks and addressing challenges with polysemantic neurons caused by superposition. In this paper, we apply SAEs to the early…

Machine Learning · Computer Science 2024-09-10 Liv Gorton

Protein language models have revolutionized structure prediction, but their nonlinear nature obscures how sequence representations inform structure prediction. While sparse autoencoders (SAEs) offer a path to interpretability here by…

Biomolecules · Quantitative Biology 2025-03-13 Nithin Parsan , David J. Yang , John J. Yang

In this work, we introduce Semantic Pyramid AutoEncoder (SPAE) for enabling frozen LLMs to perform both understanding and generation tasks involving non-linguistic modalities such as images or videos. SPAE converts between raw pixels and…

Computer Vision and Pattern Recognition · Computer Science 2023-10-31 Lijun Yu , Yong Cheng , Zhiruo Wang , Vivek Kumar , Wolfgang Macherey , Yanping Huang , David A. Ross , Irfan Essa , Yonatan Bisk , Ming-Hsuan Yang , Kevin Murphy , Alexander G. Hauptmann , Lu Jiang

Deep learning, particularly with the advancement of Large Language Models, has transformed biomolecular modeling, with protein language models such as ESM inspiring emerging RNA language models such as RiNALMo. Recent work has begun…

Biomolecules · Quantitative Biology 2026-05-18 Taehan Kim , Sangdae Nam

Sparse autoencoders (SAEs) are a promising technique for decomposing language model activations into interpretable linear features. However, current SAEs fall short of completely explaining model performance, resulting in "dark matter":…

Machine Learning · Computer Science 2025-03-26 Joshua Engels , Logan Riggs , Max Tegmark

A new semi-supervised machine learning method for the discovery of structure-spectrum relationships is developed and demonstrated using the specific example of interpreting X-ray absorption near-edge structure (XANES) spectra. This method…

Materials Science · Physics 2023-05-17 Zhu Liang , Matthew R. Carbone , Wei Chen , Fanchen Meng , Eli Stavitski , Deyu Lu , Mark S. Hybertsen , Xiaohui Qu