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Cardiac MRI is limited by long acquisition times, which can lead to patient discomfort and motion artifacts. We aim to accelerate Cartesian dynamic cardiac MRI by learning efficient, scan-adaptive undersampling patterns that preserve…

Image and Video Processing · Electrical Eng. & Systems 2026-02-24 Siddhant Gautam , Angqi Li , Prachi P. Agarwal , Anil K. Attili , Jeffrey A. Fessler , Nicole Seiberlich , Saiprasad Ravishankar

Computational models of cardiac structure and function are increasingly central to the development of subject-specific cardiac digital twins, enabling improved characterization of contractile dysfunction, pathological remodeling, and…

Deformable shape modeling approaches that describe objects in terms of their medial axis geometry (e.g., m-reps [Pizer et al., 2003]) yield rich geometrical features that can be useful for analyzing the shape of sheet-like biological…

Graphics · Computer Science 2019-03-04 Paul A. Yushkevich , Ahmed Aly , Jiancong Wang , Long Xie , Robert C. Gorman , Laurent Younes , Alison Pouch

Cardiac Magnetic Resonance Imaging (MRI) is time-consuming and error-prone. To ease the patient's burden and to increase the efficiency and robustness of cardiac exams, interest in methods based on continuous steady-state acquisition and…

Medical Physics · Physics 2020-10-06 Sebastian Rosenzweig , Nick Scholand , H. Christian M. Holme , Martin Uecker

Artificial intelligence (AI) techniques have been proposed for automating analysis of short axis (SAX) cine cardiac magnetic resonance (CMR), but no CMR analysis tool exists to automatically analyse large (unstructured) clinical CMR…

Accurate segmentation of heart structures imaged by cardiac MR is key for the quantitative analysis of pathology. High-resolution 3D MR sequences enable whole-heart structural imaging but are time-consuming, expensive to acquire and they…

Computer Vision and Pattern Recognition · Computer Science 2019-03-01 Carlo Biffi , Juan J. Cerrolaza , Giacomo Tarroni , Antonio de Marvao , Stuart A. Cook , Declan P. O'Regan , Daniel Rueckert

Delineation of anatomical structures is often the first step of many medical image analysis workflows. While convolutional neural networks achieve high performance, these do not incorporate anatomical shape information. We introduce a novel…

Image and Video Processing · Electrical Eng. & Systems 2023-10-18 Athira J Jacob , Puneet Sharma , Daniel Ruckert

We introduce an unsupervised motion-compensated image reconstruction algorithm for free-breathing and ungated 3D cardiac magnetic resonance imaging (MRI). We express the image volume corresponding to each specific motion phase as the…

Computer Vision and Pattern Recognition · Computer Science 2025-06-03 Joseph Kettelkamp , Ludovica Romanin , Sarv Priya , Mathews Jacob

Robust anatomical segmentation of chest X-rays (CXRs) remains challenging due to the scarcity of comprehensive annotations and the substantial variability of real-world acquisition conditions. We propose AnyCXR, a unified framework that…

Computer Vision and Pattern Recognition · Computer Science 2026-01-05 Zifei Dong , Wenjie Wu , Jinkui Hao , Tianqi Chen , Ziqiao Weng , Bo Zhou

In silico tissue models enable evaluating quantitative models of magnetic resonance imaging. This includes validating and sensitivity analysis of imaging biomarkers and tissue microstructure parameters. We propose a novel method to generate…

Cardiac Magnetic Resonance imaging (CMR) is the gold standard for assessing cardiac function. Segmenting the left ventricle (LV), right ventricle (RV), and LV myocardium (MYO) in CMR images is crucial but time-consuming. Deep learning-based…

Image and Video Processing · Electrical Eng. & Systems 2023-09-06 Zihao Chen , Xiao Chen , Yikang Liu , Eric Z. Chen , Terrence Chen , Shanhui Sun

Background and Objective: To assess the feasibility and accuracy of reconstructing time-resolved, three-dimensional, subject-specific aortic geometries from a limited number of standard cine 2D magnetic resonance imaging (MRI) acquisitions.…

Image and Video Processing · Electrical Eng. & Systems 2026-04-01 Gloria Wolkerstorfer , Stefano Buoso , Rabea Schlenker , Jochen von Spiczak , Robert Manka , Sebastian Kozerke

In this paper, the problem of orientation correction in cardiac MRI images is investigated and a framework for orientation recognition via deep neural networks is proposed. For multi-modality MRI, we introduce a transfer learning strategy…

Image and Video Processing · Electrical Eng. & Systems 2022-11-22 Jiyao Liu

Decreased myocardial capillary density has been reported as an important histopathological feature associated with various heart disorders. Quantitative assessment of cardiac capillarization typically involves double immunostaining of…

Image and Video Processing · Electrical Eng. & Systems 2023-12-01 Zhao Zhang , Xiwen Chen , William Richardson , Bruce Z. Gao , Abolfazl Razi , Tong Ye

Cardiac magnetic resonance (CMR) is used extensively in the diagnosis and management of cardiovascular disease. Deep learning methods have proven to deliver segmentation results comparable to human experts in CMR imaging, but there have…

Computer Vision and Pattern Recognition · Computer Science 2018-10-25 Gerard Snaauw , Dong Gong , Gabriel Maicas , Anton van den Hengel , Wiro J. Niessen , Johan Verjans , Gustavo Carneiro

Purpose: To develop a deep learning method on a nonlinear manifold to explore the temporal redundancy of dynamic signals to reconstruct cardiac MRI data from highly undersampled measurements. Methods: Cardiac MR image reconstruction is…

Image and Video Processing · Electrical Eng. & Systems 2021-04-05 Ziwen Ke , Zhuo-Xu Cui , Wenqi Huang , Jing Cheng , Sen Jia , Haifeng Wang , Xin Liu , Hairong Zheng , Leslie Ying , Yanjie Zhu , Dong Liang

To develop an efficient motion-compensated reconstruction technique for free-breathing cardiac magnetic resonance imaging (MRI) that allows high-quality images to be reconstructed from multiple undersampled single-shot acquisitions. The…

Computer Vision and Pattern Recognition · Computer Science 2016-11-16 Aurelien Bustin , Anne Menini , Martin A. Janich , Darius Burschka , Jacques Felblinger , Anja C. S. Brau , Freddy Odille

Recent advancements in medical image segmentation techniques have achieved compelling results. However, most of the widely used approaches do not take into account any prior knowledge about the shape of the biomedical structures being…

Image and Video Processing · Electrical Eng. & Systems 2019-09-18 Zhou He , Siqi Bao , Albert Chung

Cardiac amyloidosis (CA) is a rare cardiomyopathy, with typical abnormalities in clinical measurements from echocardiograms such as reduced global longitudinal strain of the myocardium. An alternative approach for detecting CA is via neural…

Computer Vision and Pattern Recognition · Computer Science 2025-09-25 Alexander Thorley , Agis Chartsias , Jordan Strom , Roberto Lang , Jeremy Slivnick , Jamie O'Driscoll , Rajan Sharma , Dipak Kotecha , Jinming Duan , Alberto Gomez

We introduce a kernel low-rank algorithm to recover free-breathing and ungated dynamic MRI from spiral acquisitions without explicit k-space navigators. It is often challenging for low-rank methods to recover free-breathing and ungated…

Image and Video Processing · Electrical Eng. & Systems 2021-03-09 Abdul Haseeb Ahmed , Ruixi Zhou , Yang Yang , Prashant Nagpal , Michael Salerno , Mathews Jacob
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