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Determining the number of clusters is a fundamental issue in data clustering. Several algorithms have been proposed, including centroid-based algorithms using the Euclidean distance and model-based algorithms using a mixture of probability…

Machine Learning · Computer Science 2024-07-30 Ryosuke Motegi , Yoichi Seki

Motivation: Clustering is a frequently used concept in variety of bioinformatical applications. We present a new method for hierarchical clustering of data called mutual information clustering (MIC) algorithm. It uses mutual information…

Quantitative Methods · Quantitative Biology 2007-05-23 Alexander Kraskov , Harald Stögbauer , Ralph G. Andrzejak , Peter Grassberger

When faced with new data, we often conduct a cluster analysis to obtain a better understanding of the data's structure and the archetypical samples present in the data. This process often includes visualization of the data, either as a way…

Applications · Statistics 2026-04-06 Justin Lin , Julia Fukuyama

The clustering of data into physically meaningful subsets often requires assumptions regarding the number, size, or shape of the subgroups. Here, we present a new method, simultaneous coherent structure coloring (sCSC), which accomplishes…

Machine Learning · Statistics 2019-11-26 Brooke E. Husic , Kristy L. Schlueter-Kuck , John O. Dabiri

It is more and more common to explore the genome at diverse levels and not only at a single omic level. Through integrative statistical methods, omics data have the power to reveal new biological processes, potential biomarkers, and…

Methodology · Statistics 2021-03-05 Morgane Pierre-Jean , Florence Mauger , Jean-François Deleuze , Edith Le Floch

As long-endurance and seafloor-resident AUVs become more capable, there is an increasing need for extended, real-time interpretation of seafloor imagery to enable adaptive missions and optimise communication efficiency. Although offline…

Computer Vision and Pattern Recognition · Computer Science 2025-09-09 Cailei Liang , Adrian Bodenmann , Sam Fenton , Blair Thornton

In computer vision, the estimation of the fundamental matrix is a basic problem that has been extensively studied. The accuracy of the estimation imposes a significant influence on subsequent tasks such as the camera trajectory…

Computer Vision and Pattern Recognition · Computer Science 2015-04-15 Hao Wu , Yi Wan

Network data appears in very diverse applications, like biological, social, or sensor networks. Clustering of network nodes into categories or communities has thus become a very common task in machine learning and data mining. Network data…

Machine Learning · Computer Science 2020-01-24 Mireille El Gheche , Giovanni Chierchia , Pascal Frossard

Graph clustering has many important applications in computing, but due to growing sizes of graphs, even traditionally fast clustering methods such as spectral partitioning can be computationally expensive for real-world graphs of interest.…

Distributed, Parallel, and Cluster Computing · Computer Science 2019-06-11 Julian Shun , Farbod Roosta-Khorasani , Kimon Fountoulakis , Michael W. Mahoney

In order to operate in human environments, a robot's semantic perception has to overcome open-world challenges such as novel objects and domain gaps. Autonomous deployment to such environments therefore requires robots to update their…

Robotics · Computer Science 2022-09-21 Hermann Blum , Marcus G. Müller , Abel Gawel , Roland Siegwart , Cesar Cadena

The Open Computing Cluster for Advanced data Manipulation (OCCAM) is a multi-purpose flexible HPC cluster designed and operated by a collaboration between the University of Torino and the Sezione di Torino of the Istituto Nazionale di…

Distributed, Parallel, and Cluster Computing · Computer Science 2017-12-06 Marco Aldinucci , Stefano Bagnasco , Stefano Lusso , Paolo Pasteris , Sergio Rabellino , Sara Vallero

With advanced imaging, sequencing, and profiling technologies, multiple omics data become increasingly available and hold promises for many healthcare applications such as cancer diagnosis and treatment. Multimodal learning for integrative…

Genomics · Quantitative Biology 2022-12-20 Sina Tabakhi , Mohammod Naimul Islam Suvon , Pegah Ahadian , Haiping Lu

Deep neural networks are a family of computational models that have led to a dramatical improvement of the state of the art in several domains such as image, voice or text analysis. These methods provide a framework to model complex,…

Machine Learning · Statistics 2018-02-12 Louis Falissard , Guy Fagherazzi , Newton Howard , Bruno Falissard

Modern graph or network datasets often contain rich structure that goes beyond simple pairwise connections between nodes. This calls for complex representations that can capture, for instance, edges of different types as well as so-called…

Social and Information Networks · Computer Science 2020-02-19 Ilya Amburg , Nate Veldt , Austin R. Benson

Multi-view clustering has become a significant area of research, with numerous methods proposed over the past decades to enhance clustering accuracy. However, in many real-world applications, it is crucial to demonstrate a clear…

Machine Learning · Computer Science 2025-02-07 Mudi Jiang , Lianyu Hu , Zengyou He , Zhikui Chen

Clustering is a fundamental task in data mining and machine learning, particularly for analyzing large-scale data. In this paper, we introduce Clust-Splitter, an efficient algorithm based on nonsmooth optimization, designed to solve the…

Machine Learning · Computer Science 2026-03-19 Jenni Lampainen , Kaisa Joki , Napsu Karmitsa , Marko M. Mäkelä

Clustering is an unsupervised learning technique in which data or objects are grouped into sets based on some similarity measure. Most of the clustering algorithms assume that the main memory is infinite and can accommodate the set of…

Data Structures and Algorithms · Computer Science 2015-05-25 Pankaj Kumar Yadav , Sriniwas Pandey , Sraban Kumar Mohanty

Given the increasing complexity of omics datasets, a key challenge is not only improving classification performance but also enhancing the transparency and reliability of model decisions. Effective model performance and feature selection…

Machine Learning · Computer Science 2025-05-07 Diego Perazzolo , Pietro Fanton , Ilaria Barison , Marny Fedrigo , Annalisa Angelini , Chiara Castellani , Enrico Grisan

Explaining the results of clustering pipelines by unraveling the characteristics of each cluster is a challenging task, often addressed manually through visualizations and queries. Existing solutions from the domain of Explainable…

Databases · Computer Science 2024-12-31 Sariel Ofek , Amit Somech

We introduce Cloud DIKW as an analysis environment supporting scientific discovery through integrated parallel batch and streaming processing, and apply it to one representative domain application: social media data stream clustering.…

Distributed, Parallel, and Cluster Computing · Computer Science 2017-03-07 Xiaoming Gao , Emilio Ferrara , Judy Qiu
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