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Fish schools are able to display a rich variety of collective states and behavioural responses when they are confronted to threats. However a school's response to perturbations may be different depending on its collective state. Here we use…

Quantitative Methods · Quantitative Biology 2015-02-04 Daniel S. Calovi , Ugo Lopez , Paul Schuhmacher , Hugues Chaté , Clément Sire , Guy Theraulaz

We present nbodykit, an open-source, massively parallel Python toolkit for analyzing large-scale structure (LSS) data. Using Python bindings of the Message Passing Interface (MPI), we provide parallel implementations of many commonly used…

Instrumentation and Methods for Astrophysics · Physics 2018-10-31 Nick Hand , Yu Feng , Florian Beutler , Yin Li , Chirag Modi , Uros Seljak , Zachary Slepian

We consider a version of the classical group testing problem motivated by PCR testing for COVID-19. In the so-called tropical group testing model, the outcome of a test is the lowest cycle threshold (Ct) level of the individuals pooled…

Information Theory · Computer Science 2024-10-15 Vivekanand Paligadu , Oliver Johnson , Matthew Aldridge

Autonomous underwater robots are increasingly deployed for environmental monitoring, infrastructure inspection, subsea resource exploration, and long-horizon exploration. Yet, despite rapid advances in learning-based planning and control,…

Robotics · Computer Science 2026-03-10 Jingzehua Xu , Guanwen Xie , Jiwei Tang , Shuai Zhang , Xiaofan Li

We introduce a comprehensive theoretical and algorithmic framework that bridges formal group theory and group entropies with modern machine learning, paving the way for an infinite, flexible family of Mirror Descent (MD) optimization…

Machine Learning · Computer Science 2026-03-10 Andrzej Cichocki , Piergiulio Tempesta

In the era of the Internet of Things (IoT), decentralized paradigms for machine learning are gaining prominence. In this paper, we introduce a federated learning model that capitalizes on the Euclidean distance between device model weights…

Machine Learning · Computer Science 2024-01-24 Mohammed El Hanjri , Hamza Reguieg , Adil Attiaoui , Amine Abouaomar , Abdellatif Kobbane , Mohamed El Kamili

Markov Random Field models are powerful tools for the study of complex systems. However, little is known about how the interactions between the elements of such systems are encoded, especially from an information-theoretic perspective. In…

Information Theory · Computer Science 2015-03-19 Alexandre L. M. Levada

We investigate a one-dimensional water-like lattice model with Van der Waals and hydrogen-bond interactions, allowing for particle number fluctuations through a chemical potential. The model, defined on a chain with periodic boundary…

Statistical Mechanics · Physics 2025-11-25 F. F. Braz , S. M. de Souza , M. L. Lyra , Onofre Rojas

Recent developments in many-body potential energy representation via deep learning have brought new hopes to addressing the accuracy-versus-efficiency dilemma in molecular simulations. Here we describe DeePMD-kit, a package written in…

Computational Physics · Physics 2018-05-23 Han Wang , Linfeng Zhang , Jiequn Han , Weinan E

As decentralized finance (DeFi) evolves, distinguishing between user behaviors - liquidity provision versus active trading - has become vital for risk modeling and on-chain reputation. We propose a behavioral scoring framework for Uniswap…

General Finance · Quantitative Finance 2025-07-29 Dhanashekar Kandaswamy , Ashutosh Sahoo , Akshay SP , Gurukiran S , Parag Paul , Girish G N

We present a method to estimate the quantum Fisher information (QFI) of many-body quantum states in the presence of decoherence, where its direct evaluation requires the full spectral resolution of the density matrix. We show that, for…

Quantum Physics · Physics 2026-05-25 Francesco Musso , Vittorio Vitale , Sara Murciano

During a spontaneous change, a macroscopic physical system will evolve towards a macro-state with more realizations. This observation is at the basis of the Statistical Mechanical version of the Second Law of Thermodynamics, and it provides…

Statistical Mechanics · Physics 2020-04-22 Mengjie Zu , Arunkumar Bupathy , Daan Frenkel , Srikanth Sastry

Accurate clock synchronization is required for collaborative operations among nodes across wireless networks. Compared with traditional layer-by-layer methods, cooperative network synchronization techniques lead to significant improvement…

Information Theory · Computer Science 2018-02-14 Yifeng Xiong , Nan Wu , Yuan Shen , Moe Z. Win

Autonomous ocean-exploring vehicles have begun to take advantage of onboard sensor measurements of water properties such as salinity and temperature to locate oceanic features in real time. Such targeted sampling strategies enable more…

Fluid Dynamics · Physics 2024-03-19 Peter Gunnarson , John O. Dabiri

This study investigates entropy's potential for analyzing scientific research patterns across disciplines. Originating from thermodynamics, entropy now measures uncertainty and diversity in information systems. We examine Shannon Entropy,…

Physics and Society · Physics 2025-03-27 Yujie Shi , Alex Jie Yang , Sanhong Deng

We consider an interacting particle system proposed in the literature to model fish behavior. In this model, the agents move at constant speed and control the curvature of their trajectory (i.e. the time-derivative of their velocity) so as…

Analysis of PDEs · Mathematics 2025-12-03 Pierre Degond , Antoine Diez , Amic Frouvelle

The dynamics of coherent structures present in real-world environmental data is analyzed. The method developed in this Paper combines the power of the Proper Orthogonal Decomposition (POD) technique to identify these coherent structures in…

Chaotic Dynamics · Physics 2009-10-31 Cristobal Lopez , Emilio Hernandez-Garcia

We consider a class of Dean-Kawasaki type equations on $\mathbb{T}$ with logarithmic repulsive interactions depending on the inverse temperature $\beta$ and a new spectral approximation to the noise part, which approximately features Otto's…

Probability · Mathematics 2024-12-12 Hao Ding

Pulse-type weakly electric fishes communicate through electrical discharges with a stereotyped waveform, varying solely the interval between pulses according to the information being transmitted. This simple codification mechanism is…

Quantitative Methods · Quantitative Biology 2014-12-05 Paulo Matias , Jan Frans Willem Slaets , Reynaldo Daniel Pinto

We present Karate Club a Python framework combining more than 30 state-of-the-art graph mining algorithms which can solve unsupervised machine learning tasks. The primary goal of the package is to make community detection, node and whole…

Machine Learning · Computer Science 2020-08-10 Benedek Rozemberczki , Oliver Kiss , Rik Sarkar
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