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We revisit the generation of balanced octrees for adaptive mesh refinement (AMR) of Cartesian domains with immersed complex geometries. In a recent short note [Hasbestan and Senocak, J. Comput. Phys. vol. 351:473-477 (2017)], we showed that…

Computational Engineering, Finance, and Science · Computer Science 2018-05-23 Jaber J. Hasbestan , Inanc Senocak

In this paper we present a full-fledged scheme for the second order accurate, divergence-free evolution of vector fields on an adaptive mesh refinement (AMR) hierarchy. We focus here on adaptive mesh MHD. The scheme is based on making a…

Astrophysics · Physics 2009-11-07 Dinshaw Balsara

We propose a sparse interpolation construction and a practical coarsening algorithm for the algebraic multigrid (AMG) method, tailored towards H(curl). Building on the generalized AMG framework, we introduce an interior/exterior splitting…

Numerical Analysis · Mathematics 2026-03-02 Taoli Shen , James Brannick , Robert Falgout , Karsten Kahl , Jacob Schroder

The evolution of parallel I/O library as well as new concepts such as 'in transit' and 'in situ' visualization and analysis have been identified as key technologies to circumvent I/O bottleneck in pre-exascale applications. Nevertheless,…

Instrumentation and Methods for Astrophysics · Physics 2022-09-13 Loïc Strafella , Damien Chapon

We present an approach to constructing a practical coarsening algorithm and interpolation operator for the algebraic multigrid (AMG) method, tailored towards systems of partial differential equations (PDEs) with large near-kernels, such as…

Numerical Analysis · Mathematics 2025-01-28 James Brannick , Robert Falgout , Karsten Kahl , Jacob Schroder , Taoli Shen

This paper presents a heterogeneous adaptive mesh refinement (AMR) framework for efficient simulation of moderately stiff reactive problems. This framework features an elaborate subcycling-in-time algorithm along with a specialized…

Computational Physics · Physics 2025-06-04 Yuqi Wang , Yadong Zeng , Ralf Deiterding , Jianhan Liang

Morphological reconstruction (MR) is often employed by seeded image segmentation algorithms such as watershed transform and power watershed as it is able to filter seeds (regional minima) to reduce over-segmentation. However, MR might…

Computer Vision and Pattern Recognition · Computer Science 2019-10-02 Tao Lei , Xiaohong Jia , Tongliang Liu , Shigang Liu , Hongying Meng , Asoke K. Nandi

An adaptive mesh refinement (AMR) scheme is implemented in a distributed environment using Message Passing Interface (MPI) to find solutions to the nonlinear sigma model. Previous work studied behavior similar to black hole critical…

General Relativity and Quantum Cosmology · Physics 2015-06-25 Steven L. Liebling

Block-structured adaptive mesh refinement (AMR) provides the basis for the temporal and spatial discretization strategy for a number of ECP applications in the areas of accelerator design, additive manufacturing, astrophysics, combustion,…

Mathematical Software · Computer Science 2025-03-21 Weiqun Zhang , Andrew Myers , Kevin Gott , Ann Almgren , John Bell

Computationally solving the equations of elasticity is a key component in many materials science and mechanics simulations. Phenomena such as deformation-induced microstructure evolution, microfracture, and microvoid nucleation are examples…

Computational Engineering, Finance, and Science · Computer Science 2021-12-08 Brandon Runnels , Vinamra Agrawal , Weiqun Zhang , Ann Almgren

We present here the result of continuation work, performed to further fulfill the vision we outlined in [Harel,Lekien,P\'eba\"y-2017] for the visualization and analysis of tree-based adaptive mesh refinement (AMR) simulations, using the…

Graphics · Computer Science 2017-03-02 Guénolé Harel , Jacques-Bernard Lekien , Philippe P. Pébaÿ

This work introduces a novel adaptive mesh refinement (AMR) method that utilizes dominant balance analysis (DBA) for efficient and accurate grid adaptation in computational fluid dynamics (CFD) simulations. The proposed method leverages a…

Fluid Dynamics · Physics 2024-11-06 Gaurav Kumar , Aditya G. Nair

Adaptive mesh refinement (AMR) is necessary for efficient finite element simulations of complex physical phenomenon, as it allocates limited computational budget based on the need for higher or lower resolution, which varies over space and…

The forest-of-octrees approach to parallel adaptive mesh refinement and coarsening (AMR) has recently been demonstrated in the context of a number of large-scale PDE-based applications. Although linear octrees, which store only leaf…

Distributed, Parallel, and Cluster Computing · Computer Science 2015-11-05 Tobin Isaac , Carsten Burstedde , Lucas C. Wilcox , Omar Ghattas

We present an adaptive variational procedure for unstructured meshes to capture fluid-fluid interfaces in two-phase flows. The two phases are modeled by the phase-field finite element formulation, which involves the conservative Allen-Cahn…

Fluid Dynamics · Physics 2018-07-05 Vaibhav Joshi , Rajeev K. Jaiman

We have developed a simulation code with the techniques which enhance both spatial and time resolution of the PM method for which the spatial resolution is restricted by the spacing of structured mesh. The adaptive mesh refinement (AMR)…

Astrophysics · Physics 2009-11-06 Hideki Yahagi , Yuzuru Yoshii

Algebraic multigrid (AMG) methods derive their optimal efficiency from the interplay between a relaxation process and a corresponding coarse grid correction. In many standard formulations, relaxation and coarse-graining are analyzed and…

Numerical Analysis · Mathematics 2026-03-30 Rayan Moussa , Karsten Kahl

The forest-of-refinement-trees approach allows for dynamic adaptive mesh refinement (AMR) at negligible cost. While originally developed for quadrilateral and hexahedral elements, previous work established the theory and algorithms for…

Distributed, Parallel, and Cluster Computing · Computer Science 2026-05-25 David Knapp , Johannes Albrecht Holke , Thomas Spenke , Carsten Burstedde , Lukas Dreyer

Adaptive mesh refinement (AMR) reduces computational costs in CFD by concentrating resolution where needed, but efficiently embedding complex, non-aligned geometries on GPUs remains challenging. We present a GPU-native algorithm for…

Computational Engineering, Finance, and Science · Computer Science 2026-04-28 Khodr Jaber , Ebenezer E. Essel , Pierre E. Sullivan

Computational studies that use block-structured adaptive mesh refinement (AMR) approaches suffer from unnecessarily high mesh resolution in regions adjacent to important solution features. This deficiency limits the performance of AMR…

Computational Physics · Physics 2022-03-02 Brandon Gusto , Tomasz Plewa