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General Multimodal Large Language Models (MLLMs) often underperform in capturing domain-specific nuances in medical diagnosis, trailing behind fully supervised baselines. Although fine-tuning provides a remedy, the high costs of expert…

Computer Vision and Pattern Recognition · Computer Science 2026-03-31 Wenkai Zhao , Zipei Wang , Mengjie Fang , Di Dong , Jie Tian , Lingwei Zhang

Large multimodal models (LMMs) typically employ an encoding module to transform multimodal data inputs into embeddings, which are then fed to language models for further processing. However, efficiently serving LMMs remains highly…

Distributed, Parallel, and Cluster Computing · Computer Science 2025-09-30 Tianyu Guo , Tianming Xu , Xianjie Chen , Junru Chen , Nong Xiao , Xianwei Zhang

Most multi-agent systems rely exclusively on autoregressive language models (ARMs) that are based on sequential generation. Although effective for fluent text, ARMs limit global reasoning and plan revision. On the other hand, Discrete…

Machine Learning · Computer Science 2026-03-11 Lina Berrayana , Ahmed Heakl , Abdullah Sohail , Thomas Hofmann , Salman Khan , Wei Chen

The emergent abilities of large language models (LLMs) have demonstrated great potential in solving medical questions. They can possess considerable medical knowledge, but may still hallucinate and are inflexible in the knowledge updates.…

Computation and Language · Computer Science 2024-10-14 Guangzhi Xiong , Qiao Jin , Xiao Wang , Minjia Zhang , Zhiyong Lu , Aidong Zhang

This paper presents a novel Natural Language Processing (NLP) framework for enhancing medical diagnosis through the integration of advanced techniques in data augmentation, feature extraction, and classification. The proposed approach…

Computation and Language · Computer Science 2025-02-12 Mohammad Ali Labbaf Khaniki , Sahabeh Saadati , Mohammad Manthouri

Molecule generation and optimization is a fundamental task in chemical domain. The rapid development of intelligent tools, especially large language models (LLMs) with powerful knowledge reserves and interactive capabilities, has provided…

Machine Learning · Computer Science 2026-02-10 Haoran Liu , Zheni Zeng , Yukun Yan , Yuxuan Chen , Yunduo Xiao

Large reasoning models (LRMs) excel at complex reasoning tasks but typically generate lengthy sequential chains-of-thought, resulting in long inference times before arriving at the final answer. To address this challenge, we introduce…

Artificial Intelligence · Computer Science 2025-12-04 Emil Biju , Shayan Talaei , Zhemin Huang , Mohammadreza Pourreza , Azalia Mirhoseini , Amin Saberi

We present MedXIAOHE, a medical vision-language foundation model designed to advance general-purpose medical understanding and reasoning in real-world clinical applications. MedXIAOHE achieves state-of-the-art performance across diverse…

Recent studies have demonstrated the feasibility of modeling single-cell data as natural languages and the potential of leveraging powerful large language models (LLMs) for understanding cell biology. However, a comprehensive evaluation of…

Quantitative Methods · Quantitative Biology 2025-05-14 Fan Zhang , Tianyu Liu , Zhihong Zhu , Hao Wu , Haixin Wang , Donghao Zhou , Yefeng Zheng , Kun Wang , Xian Wu , Pheng-Ann Heng

Masked diffusion models (MDMs) for text offer a compelling alternative to traditional autoregressive language models. Parallel generation makes them efficient, but their computational capabilities and the limitations inherent in their…

Machine Learning · Computer Science 2026-04-28 Anej Svete , Ashish Sabharwal

Biomedical queries often rely on a deep understanding of specialized knowledge such as gene regulatory mechanisms and pathological processes of diseases. They require detailed analysis of complex physiological processes and effective…

Computation and Language · Computer Science 2026-02-02 Congying Liu , Xingyuan Wei , Peipei Liu , Yiqing Shen , Yanxu Mao , Tiehan Cui

Structured data offers a sophisticated mechanism for the organization of information. Existing methodologies for the text-serialization of structured data in the context of large language models fail to adequately address the heterogeneity…

Computation and Language · Computer Science 2024-02-20 YiQiu Guo , Yuchen Yang , Ya Zhang , Yu Wang , Yanfeng Wang

Large language models (LLMs) have shown promise in clinical diagnosis but remain limited by unreliable report generation, weak evidence grounding, and opaque reasoning. We propose MedCollab, an IBIS-guided multi-agent framework for…

Multiagent Systems · Computer Science 2026-05-27 Yuqi Zhan , Xinyue Wu , Tianyu Lin , Yutong Bao , Xiaoyu Wang , Weihao Cheng , Huangwei Chen , Feiwei Qin , Zhu Zhu

Modern distributed systems produce massive, heterogeneous logs essential for reliability, security, and anomaly detection. Converting these free-form messages into structured templates (log parsing) is challenging due to evolving formats…

Software Engineering · Computer Science 2026-04-23 Amir Shetaia , Sean Kauffman

Large Language Models (LLMs) have reshaped natural language processing, powering applications from multi-hop retrieval and question answering to autonomous agent workflows. Yet, prompt engineering -- the task of crafting textual inputs to…

Computation and Language · Computer Science 2025-01-31 Li Yin , Zhangyang Wang

In modern e-commerce search systems, dense retrieval has become an indispensable component. By computing similarities between query and item (product) embeddings, it efficiently selects candidate products from large-scale repositories. With…

Information Retrieval · Computer Science 2025-10-20 Jianting Tang , Dongshuai Li , Tao Wen , Fuyu Lv , Dan Ou , Linli Xu

Medical vision-language models (VLMs) show strong performance on radiology tasks but often produce fluent yet weakly grounded conclusions due to over-reliance on a dominant modality. We introduce a context-aligned reasoning framework that…

Computer Vision and Pattern Recognition · Computer Science 2026-04-13 Sumra Khan , Sagar Chhabriya , Aizan Zafar , Sheeraz Arif , Amgad Muneer , Anas Zafar , Shaina Raza , Rizwan Qureshi

Directed Acyclic Graphs (DAGs) are widely used to represent structured knowledge in scientific and technical domains. However, datasets for real-world DAGs remain scarce because constructing them typically requires expert interpretation of…

Artificial Intelligence · Computer Science 2026-03-27 Shu Wan , Saketh Vishnubhatla , Iskander Kushbay , Tom Heffernan , Aaron Belikoff , Raha Moraffah , Huan Liu

Despite the growing use of Electronic Health Records (EHR) for AI-assisted diagnosis prediction, most data-driven models struggle to incorporate clinically meaningful medical knowledge. They often rely on limited ontologies, lacking…

Machine Learning · Computer Science 2025-04-17 Pengfei Hu , Chang Lu , Fei Wang , Yue Ning

Recent advances in deep research systems enable large language models to retrieve, synthesize, and reason over large-scale external knowledge. In medicine, developing clinical guidelines critically depends on such deep evidence integration.…