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High-Performance Computing (HPC) platforms enable scientific software to achieve breakthroughs in many research fields such as physics, biology, and chemistry, by employing Research Software Engineering (RSE) techniques. These include 1)…

Distributed, Parallel, and Cluster Computing · Computer Science 2019-10-16 Matan Rusanovsky , Re'em Harel , Lee-or Alon , Idan Mosseri , Harel Levin , Gal Oren

SimTensor is a multi-platform, open-source software for generating artificial tensor data (either with CP/PARAFAC or Tucker structure) for reproducible research on tensor factorization algorithms. SimTensor is a stand-alone application…

Mathematical Software · Computer Science 2016-12-13 Hadi Fanaee-T , Joao Gama

Polysomnography (PSG) data is recorded and stored in various formats depending on the recording software. Although the PSG data can usually be exported to open formats, such as the European Data Format (EDF), they are limited in data types,…

Databases · Computer Science 2024-02-13 Riku Huttunen , Matias Rusanen , Sami Nikkonen , Henri Korkalainen , Samu Kainulainen

Nowadays, analyzing and reducing the ever larger astronomical datasets is becoming a crucial challenge, especially for long cumulated observation times. The INTEGRAL/SPI X-gamma-ray spectrometer is an instrument for which it is essential to…

Instrumentation and Methods for Astrophysics · Physics 2013-05-27 L. Bouchet , P. Amestoy , A. Buttari , F. -H. Rouet , M. Chauvin

Conventional focusing methods for Synthetic Aperture Radar (SAR) employ block processing efficiently but remain latency-heavy processes that prevent the realisation of a closed-loop cognitive SAR vision system. We present the first Online…

Image and Video Processing · Electrical Eng. & Systems 2026-05-12 Sebastian Fieldhouse , Roberto Del Prete , Gabriele Daga , Nathaniel Rensly , Gabriele Meoni , Kea-Tiong Tang

The Hubble Advanced Spectral Products (HASP) program is designed to robustly coadd Cosmic Origins Spectrograph (COS) and Space Telescope Imaging Spectrograph (STIS) spectra within the Mikulski Archive for Space Telescopes (MAST) in an…

Speculative decoding has emerged as a promising lossless approach for accelerating Large Language Models (LLMs). As reasoning LLMs increasingly suffer from decode-stage overhead and approximation-based methods degrade accuracy, lossless…

Hardware Architecture · Computer Science 2026-05-27 Soongyu Choi , Yuntae Kim , Muyoung Son , Joo-Young Kim

We here present SIMLR (Single-cell Interpretation via Multi-kernel LeaRning), an open-source tool that implements a novel framework to learn a sample-to-sample similarity measure from expression data observed for heterogenous samples. SIMLR…

Genomics · Quantitative Biology 2018-01-22 Bo Wang , Daniele Ramazzotti , Luca De Sano , Junjie Zhu , Emma Pierson , Serafim Batzoglou

Deep learning continues to push state-of-the-art performance for the semantic segmentation of color (i.e., RGB) imagery; however, the lack of annotated data for many remote sensing sensors (i.e. hyperspectral imagery (HSI)) prevents…

Machine Learning · Statistics 2018-04-03 Ronald Kemker , Utsav B. Gewali , Christopher Kanan

The Australian Square Kilometre Array Pathfinder (ASKAP) collects images of the sky at radio wavelengths with an unprecedented field of view, combined with a high angular resolution and sub-millijansky sensitivities. The large quantity of…

Instrumentation and Methods for Astrophysics · Physics 2021-01-20 Sergio Pintaldi , Adam Stewart , Andrew O'Brien , David Kaplan , Tara Murphy

Turning the current experimental plasma accelerator state-of-the-art from a promising technology into mainstream scientific tools depends critically on high-performance, high-fidelity modeling of complex processes that develop over a wide…

Accelerator Physics · Physics 2018-12-26 J. -L. Vay , A. Almgren , J. Bell , L. Ge , D. P. Grote , M. Hogan , O. Kononenko , R. Lehe , A. Myers , C. Ng , J. Park , R. Ryne , O. Shapoval , M. Thevenet , W. Zhang

Boundary representation (B-rep) generated from computer-aided design (CAD) is widely used in industry, with several large datasets available. However, the data in these datasets is represented in STEP format, requiring a CAD kernel to read…

Computer Vision and Pattern Recognition · Computer Science 2025-06-09 Nafiseh Izadyar , Sai Chandra Madduri , Teseo Schneider

Current advances in AI and its applicability have highlighted the need to ensure its trustworthiness for legal, ethical, and even commercial reasons. Sub-symbolic machine learning algorithms, such as the LLMs, simulate reasoning but…

Artificial Intelligence · Computer Science 2025-11-03 Alexis R. Tudor , Yankai Zeng , Huaduo Wang , Joaquin Arias , Gopal Gupta

Superimposed pilot (SIP) schemes face significant challenges in effectively superimposing and separating pilot and data signals, especially in multiuser mobility scenarios with rapidly varying channels. To address these challenges, we…

Signal Processing · Electrical Eng. & Systems 2025-10-14 Run Gu , Renjie Xie , Wei Xu , Zhaohui Yang , Kaibin Huang

Graphs model several real-world phenomena. With the growth of unstructured and semi-structured data, parallelization of graph algorithms is inevitable. Unfortunately, due to inherent irregularity of computation, memory access, and…

Distributed, Parallel, and Cluster Computing · Computer Science 2023-05-08 Nibedita Behera , Ashwina Kumar , Ebenezer Rajadurai T , Sai Nitish , Rajesh Pandian M , Rupesh Nasre

As a dedicated solar radio interferometer, the MingantU SpEctral RadioHeliograph (MUSER) generates massive observational data in the frequency range of 400 MHz -- 15 GHz. High-performance imaging forms a significantly important aspect of…

Instrumentation and Methods for Astrophysics · Physics 2017-12-21 Ying Mei , Feng Wang , Wei Wang , Lin-jie Chen , Ying-bo Liu , Hui Deng , Wei Dai , Cui-yin Liu , Yi-hua Yan

To enhance the efficiency, scalability, and cross-survey applicability of stellar parameter inference in large spectroscopic datasets, we present a modular, parallelized Python framework with automated error estimation, built on the LAMOST…

JScanam is the default map-maker for Herschel/PACS photometer observations. Making use of the redundant information from multiple passages on the sky with different scanning directions, JScanam is able to remove the $1/f$ noise that…

Instrumentation and Methods for Astrophysics · Physics 2015-12-11 Javier Graciá-Carpio , Michael Wetzstein , Hélène Roussel

High performance computing has been used in various fields of astrophysical research. But most of it is implemented on massively parallel systems (supercomputers) or graphical processing unit clusters. With the advent of multicore…

Instrumentation and Methods for Astrophysics · Physics 2013-07-30 Navtej Singh , Lisa-Marie Browne , Ray Butler

Automated source extraction and parameterization represents a crucial challenge for the next-generation radio interferometer surveys, such as those performed with the Square Kilometre Array (SKA) and its precursors. In this paper we present…

Instrumentation and Methods for Astrophysics · Physics 2016-05-09 S. Riggi , A. Ingallinera , P. Leto , F. Cavallaro , F. Bufano , F. Schillirò , C. Trigilio , G. Umana , C. S. Buemi , R. P. Norris