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Bayesian phylogenetics typically estimates a posterior distribution, or aspects thereof, using Markov chain Monte Carlo methods. These methods integrate over tree space by applying local rearrangements to move a tree through its space as a…

Range reporting is a classical problem in computational geometry. A (rectangular) reporting data structure stores a point set $P$, such that, given a (rectangular) query region $\Delta$, it returns all points in $P \cap \Delta$. A variety…

Computational Geometry · Computer Science 2025-12-05 Sarita de Berg , Emil Toftegaard Gæde , Ivor van der Hoog , Henrik Reinstädtler , Eva Rotenberg

Retrieval-Augmented Generation (RAG) is a promising approach to mitigate hallucinations in Large Language Models (LLMs) for legal applications, but its reliability is critically dependent on the accuracy of the retrieval step. This is…

Computation and Language · Computer Science 2025-10-09 Markus Reuter , Tobias Lingenberg , Rūta Liepiņa , Francesca Lagioia , Marco Lippi , Giovanni Sartor , Andrea Passerini , Burcu Sayin

To date, most directed acyclic graphs (DAGs) structure learning approaches require data to be stored in a central server. However, due to the consideration of privacy protection, data owners gradually refuse to share their personalized raw…

Machine Learning · Computer Science 2023-01-18 Erdun Gao , Junjia Chen , Li Shen , Tongliang Liu , Mingming Gong , Howard Bondell

The need for scalable concurrent ordered set data structures with linearizable range query support is increasing due to the rise of multicore computers, data processing platforms and in-memory databases. This paper presents a new concurrent…

Distributed, Parallel, and Cluster Computing · Computer Science 2017-09-05 Kjell Winblad

Retrieval-Augmented Generation (RAG) has emerged as a powerful technique for enhancing the quality of responses in Question-Answering (QA) tasks. However, existing approaches often struggle with retrieving contextually relevant information,…

Computation and Language · Computer Science 2026-01-27 Tianyi Yang , Nashrah Haque , Vaishnave Jonnalagadda , Yuya Jeremy Ong , Zhehui Chen , Yanzhao Wu , Lei Yu , Divyesh Jadav , Wenqi Wei

Retrieval-augmented generation (RAG) enhances large language models (LLMs) by retrieving documents from an external corpus at inference time. When this corpus contains sensitive information, however, unprotected RAG systems are at risk of…

Machine Learning · Computer Science 2025-11-12 Ruihan Wu , Erchi Wang , Zhiyuan Zhang , Yu-Xiang Wang

As an important paradigm for enhancing the generation quality of Large Language Models (LLMs), retrieval-augmented generation (RAG) faces the two challenges regarding retrieval accuracy and computational efficiency. This paper presents a…

Information Retrieval · Computer Science 2026-05-29 Zihang Li , Wenjun Liu , Yikun Zong , Jiawen Tao , Siying Dai , Songcheng Ren , Zirui Liu , Yuhang Wang , Yanbing Jiang , Tong Yang

Proximity graphs (PG) have gained increasing popularity as the state-of-the-art solutions to $k$-approximate nearest neighbor ($k$-ANN) search on high-dimensional data, which serves as a fundamental function in various fields, e.g.,…

Databases · Computer Science 2025-02-18 Shuo Yang , Jiadong Xie , Yingfan Liu , Jeffrey Xu Yu , Xiyue Gao , Qianru Wang , Yanguo Peng , Jiangtao Cui

The search space of Bayesian Network structures is usually defined as Acyclic Directed Graphs (DAGs) and the search is done by local transformations of DAGs. But the space of Bayesian Networks is ordered by DAG Markov model inclusion and it…

Machine Learning · Computer Science 2013-01-14 Tomas Kocka , Robert Castelo

Retrieval-Augmented Generation (RAG) is widely used to ground large language models in external knowledge sources. However, when applied to heterogeneous corpora and multi-step queries, Naive RAG pipelines often degrade in quality due to…

Information Retrieval · Computer Science 2026-04-10 Valeriy Kovalskiy , Nikita Belov , Nikita Miteyko , Igor Reshetnikov , Max Maximov

Range Minimum Query (RMQ) is an important building brick of many compressed data structures and string matching algorithms. Although this problem is essentially solved in theory, with sophisticated data structures allowing for constant time…

Data Structures and Algorithms · Computer Science 2017-11-29 Tomasz Kowalski , Szymon Grabowski

Frequent pattern mining is a relevant method to analyse structured data, like sequences, trees or graphs. It consists in identifying characteristic substructures of a dataset. This paper deals with a new type of patterns for tree data:…

Data Structures and Algorithms · Computer Science 2024-01-05 Romain Azaïs , Florian Ingels

Estimating the structure of directed acyclic graphs (DAGs) from observational data remains a significant challenge in machine learning. Most research in this area concentrates on learning a single DAG for the entire population. This paper…

Machine Learning · Statistics 2024-02-21 Ryan Thompson , Edwin V. Bonilla , Robert Kohn

To measure the tree-likeness of a directed acyclic graph (DAG), a new width parameter that considers the directions of the arcs was recently introduced: scanwidth. We present the first algorithm that efficiently computes the exact scanwidth…

Data Structures and Algorithms · Computer Science 2026-05-21 Niels Holtgrefe , Leo van Iersel , Mark Jones

Efficient question-answering (QA) over extensive scientific literature is essential for evidence-based engineering decision-making. Retrieval-augmented generation (RAG) is increasingly applied to question-answering over long academic…

Information Retrieval · Computer Science 2026-03-20 Rui Yu , Tianyi Wang , Ruixia Liu , Yinglong Wang

This paper presents the current state of the art on attack and defense modeling approaches that are based on directed acyclic graphs (DAGs). DAGs allow for a hierarchical decomposition of complex scenarios into simple, easily understandable…

Cryptography and Security · Computer Science 2013-04-01 Barbara Kordy , Ludovic Piètre-Cambacédès , Patrick Schweitzer

Retrieval-Augmented Generation (RAG) has recently demonstrated the performance of Large Language Models (LLMs) in the knowledge-intensive tasks such as Question-Answering (QA). RAG expands the query context by incorporating external…

Machine Learning · Computer Science 2024-06-18 Zijian Hei , Weiling Liu , Wenjie Ou , Juyi Qiao , Junming Jiao , Guowen Song , Ting Tian , Yi Lin

Domain-specific QA systems require not just generative fluency but high factual accuracy grounded in structured expert knowledge. While recent Retrieval-Augmented Generation (RAG) frameworks improve context recall, they struggle with…

Computation and Language · Computer Science 2025-05-26 David Osei Opoku , Ming Sheng , Yong Zhang

A growing body of work has begun to study intervention design for efficient structure learning of causal directed acyclic graphs (DAGs). A typical setting is a causally sufficient setting, i.e. a system with no latent confounders, selection…