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Motivation: Developing high-performing bioinformatics models typically requires repeated cycles of hypothesis formulation, architectural redesign, and empirical validation, making progress slow, labor-intensive, and difficult to reproduce.…

Multiagent Systems · Computer Science 2026-01-22 Sunghyun Kim , Seokwoo Yun , Youngseo Yun , Youngrak Lee , Sangsoo Lim

With the advancement of Agentic AI, researchers are increasingly leveraging autonomous agents to address challenges in software engineering (SE). However, the large language models (LLMs) that underpin these agents often function as black…

Software Engineering · Computer Science 2026-04-03 Jingyue Li , André Storhaug

Eliciting reasoning has emerged as a powerful technique for improving the performance of large language models (LLMs) on complex tasks by inducing thinking. However, their effectiveness in realistic user-engaged agent scenarios remains…

Computation and Language · Computer Science 2026-02-10 Jiatong Li , Changdae Oh , Hyeong Kyu Choi , Jindong Wang , Sharon Li

Reasoning models have recently shown remarkable progress in domains such as math and coding. However, their expert-level abilities in math and coding contrast sharply with their performance in long-horizon, interactive tasks such as web…

Computation and Language · Computer Science 2025-10-13 Xiao Yu , Baolin Peng , Michel Galley , Hao Cheng , Qianhui Wu , Janardhan Kulkarni , Suman Nath , Zhou Yu , Jianfeng Gao

Large Language Model (LLM)-based agents are increasingly employed to automate complex software engineering tasks, such as program repair and issue resolution. These agents operate by autonomously generating natural language thoughts,…

Software Engineering · Computer Science 2025-10-09 Islem Bouzenia , Michael Pradel

The Transformer architecture, despite its widespread success, struggles with long-context scenarios due to quadratic computation and linear memory growth. While various linear attention variants mitigate these efficiency constraints by…

Machine Learning · Computer Science 2025-10-02 Yuqi Pan , Yongqi An , Zheng Li , Yuhong Chou , Ruijie Zhu , Xiaohui Wang , Mingxuan Wang , Jinqiao Wang , Guoqi Li

Large language models generate plausible code but cannot verify correctness. Existing multi-agent systems simulate execution or leave verification optional. We introduce execution-grounded verification as a first-class principle: every code…

Software Engineering · Computer Science 2026-04-16 Rajesh Kumar , Waqar Ali , Junaid Ahmed , Najma Imtiaz Ali , Shaban Usman

Large language models perform well on many reasoning tasks, yet they often lack awareness of whether their current knowledge or reasoning state is complete. In non-interactive puzzle settings, the narrative is fixed and the underlying…

Artificial Intelligence · Computer Science 2026-04-23 Fulong Fan , Peilin Liu , Fengzhe Liu , Shuyan Yang , Gang Yan

In large language model (LLM) agents, reasoning trajectories are treated as reliable internal beliefs for guiding actions and updating memory. However, coherent reasoning can still violate logical or evidential constraints, allowing…

Artificial Intelligence · Computer Science 2026-04-10 Wenhao Yuan , Chenchen Lin , Jian Chen , Jinfeng Xu , Xuehe Wang , Edith Cheuk Han Ngai

Large language models have advanced rapidly, from pattern recognition to emerging forms of reasoning, yet they remain confined to linguistic simulation rather than grounded understanding. They can produce fluent outputs that resemble…

Artificial Intelligence · Computer Science 2026-04-17 Rikard Rosenbacke , Carl Rosenbacke , Victor Rosenbacke , Martin McKee

Humans can perform complex tasks with long-term objectives by planning, reasoning, and forecasting outcomes of actions. For embodied agents to achieve similar capabilities, they must gain knowledge of the environment transferable to novel…

Machine Learning · Computer Science 2024-10-01 Shu Ishida

Recent advances in LLM agents have largely built on reasoning backbones like ReAct, which interleave thought and action in complex environments. However, ReAct often produces ungrounded or incoherent reasoning steps, leading to misalignment…

Computation and Language · Computer Science 2025-09-30 Jeonghye Kim , Sojeong Rhee , Minbeom Kim , Dohyung Kim , Sangmook Lee , Youngchul Sung , Kyomin Jung

Retrieval-Augmented Generation (RAG) enables large language models (LLMs) to access external knowledge sources, but the effectiveness of RAG relies on the coordination between the retriever and the generator. Since these components are…

Computation and Language · Computer Science 2025-09-24 Junlin Wang , Zehao Wu , Shaowei Lu , Yanlan Li , Xinghao Huang

Large Language Models have significantly advanced the field of code generation, demonstrating the ability to produce functionally correct code snippets. However, advancements in generative AI for code overlook foundational Software…

Software Engineering · Computer Science 2025-03-20 Mootez Saad , José Antonio Hernández López , Boqi Chen , Neil Ernst , Dániel Varró , Tushar Sharma

AI systems are becoming active participants in organizational and knowledge work. They increasingly interact with humans, coordinate workflows, and operate in multi-agent arrangements. Understanding their effects therefore requires more…

Artificial Intelligence · Computer Science 2026-05-19 Yingjie Zhang , Chun Feng , Weizhang Zhu , Tianshu Sun

Multi-agent large language model frameworks are promising for complex multi step reasoning, yet existing systems remain weak for scientific and knowledge intensive domains due to static prompts and agent roles, rigid workflows, and…

Artificial Intelligence · Computer Science 2026-03-04 Yichao Feng , Haoran Luo , Zhenghong Lin , Yiqun Sun , Pengfei Wei , Lawrence B. Hsieh , Anh Tuan Luu

Generative artificial intelligence (GenAI) and agentic systems are moving software engineering from code-centric production toward intent-centric human-agent work in which natural language, repository context, tools, tests, and governance…

Software Engineering · Computer Science 2026-05-13 Elyson De La Cruz

The increasing complexity of industrial information-integration systems demands software technologies that enable intelligent behaviour, real-time response, and efficient development. Although many programming languages and frameworks…

Software Engineering · Computer Science 2025-11-18 Burak Karaduman , Baris Tekin Tezel , Moharram Challenger

Graph reasoning agents operating from natural-language inputs must solve a coupled problem: they must reconstruct a structured graph instance from text, decide whether existing computational assets are sufficient, interact with tools under…

Artificial Intelligence · Computer Science 2026-05-12 Zike Yuan , Yukun Cao , Han Zhang , Jianzhi Yan , Le Liu , Cai ke , Yue Yu , Hui Wang , Ming Liu , Bing Qin

Reasoning is a fundamental cognitive process underlying inference, problem-solving, and decision-making. While large language models (LLMs) demonstrate strong reasoning capabilities in closed-world settings, they struggle in open-ended and…

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