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Cryo-electron tomography (Cryo-ET) is a powerful tool in structural biology for 3D visualization of cells and biological systems at resolutions sufficient to identify individual proteins in situ. The measurements are collected by tilting…

Signal Processing · Electrical Eng. & Systems 2025-09-03 Vinith Kishore , Valentin Debarnot , AmirEhsan Khorashadizadeh , Ivan Dokmanić

Machine learning interatomic potentials (MLIPs) have substantially advanced atomistic simulations in materials science and chemistry by balancing accuracy and computational efficiency. While leading MLIPs rely on representing atomic…

Materials Science · Physics 2025-05-05 Mingjian Wen , Wei-Fan Huang , Jin Dai , Santosh Adhikari

Cryo-EM is a vital technique for determining 3D structure of biological molecules such as proteins and viruses. The cryo-EM reconstruction problem is challenging due to the high noise levels, the missing poses of particles, and the…

Quantitative Methods · Quantitative Biology 2024-06-05 Larissa de Ruijter , Gabriele Cesa

Combinatorial optimization is of general interest for both theoretical study and real-world applications. Fast-developing quantum algorithms provide a different perspective on solving combinatorial optimization problems. In this paper, we…

Data Structures and Algorithms · Computer Science 2022-09-07 Tianyi Hao , Xuxin Huang , Chunjing Jia , Cheng Peng

Multiscale computational modelling is challenging due to the high computational cost of direct numerical simulation by finite elements. To address this issue, concurrent multiscale methods use the solution of cheaper macroscale surrogates…

Computational Engineering, Finance, and Science · Computer Science 2022-01-20 Vasilis Krokos , Viet Bui Xuan , Stéphane P. A. Bordas , Philippe Young , Pierre Kerfriden

Achieving chemical accuracy for strongly correlated molecules is a defining milestone for first-generation, fault-tolerant quantum computers, yet the factorial growth of three, four, and six-index tensor contractions in coupled-cluster…

The computational power increases over the past decades havegreatly enhanced the ability to simulate chemical reactions andunderstand ever more complex transformations. Tensor contractions are the fundamental computational building block of…

Mathematical Software · Computer Science 2022-01-02 Erdal Mutlu , Ruiqin Tian , Bin Ren , Sriram Krishnamoorthy , Roberto Gioiosa , Jacques Pienaar , Gokcen Kestor

The prediction of periodical time-series remains challenging due to various types of data distortions and misalignments. Here, we propose a novel model called Temporal embedding-enhanced convolutional neural Network (TeNet) to learn…

Machine Learning · Computer Science 2022-02-09 Jiajun Liu , Kun Zhao , Brano Kusy , Ji-rong Wen , Raja Jurdak

Crystal Structure Prediction (CSP) is crucial in various scientific disciplines. While CSP can be addressed by employing currently-prevailing generative models (e.g. diffusion models), this task encounters unique challenges owing to the…

Materials Science · Physics 2024-03-08 Rui Jiao , Wenbing Huang , Peijia Lin , Jiaqi Han , Pin Chen , Yutong Lu , Yang Liu

We have developed an efficient and reliable methodology for crystal structure prediction, merging ab initio total-energy calculations and a specifically devised evolutionary algorithm. This method allows one to predict the most stable…

Materials Science · Physics 2009-11-18 A. R. Oganov , C. W. Glass

Efficiency is an important issue in designing video architectures for action recognition. 3D CNNs have witnessed remarkable progress in action recognition from videos. However, compared with their 2D counterparts, 3D convolutions often…

Computer Vision and Pattern Recognition · Computer Science 2019-11-22 Zhaoyang Liu , Donghao Luo , Yabiao Wang , Limin Wang , Ying Tai , Chengjie Wang , Jilin Li , Feiyue Huang , Tong Lu

Even when starting with a very poor initial guess, the iterative configuration interaction (iCI) approach can converge from above to full CI very quickly by constructing and diagonalizing a small Hamiltonian matrix at each…

Chemical Physics · Physics 2020-01-07 Ning Zhang , Wenjian Liu , Mark R. Hoffmann

Crystal Structure Prediction (CSP) aims to discover solid crystalline materials by optimizing periodic arrangements of atoms, ions or molecules. CSP takes weeks of supercomputer time because of slow energy minimizations for millions of…

Materials Science · Physics 2021-08-17 Jakob Ropers , Marco M Mosca , Olga Anosova , Vitaliy Kurlin , Andrew I Cooper

Emotion recognition using Electroencephalogram (EEG) signals has emerged as a significant research challenge in affective computing and intelligent interaction. However, effectively combining global and local features of EEG signals to…

Signal Processing · Electrical Eng. & Systems 2023-05-10 Wei Lu , Hua Ma , Tien-Ping Tan

Despite the success of convolution- and attention-based models in vision tasks, their rigid receptive fields and complex architectures limit their ability to model irregular spatial patterns and hinder interpretability, therefore posing…

Computer Vision and Pattern Recognition · Computer Science 2025-12-22 Xiangshuai Song , Jun-Jie Huang , Tianrui Liu , Ke Liang , Chang Tang

Anisotropy in crystals plays a pivotal role in many technological applications. For example, anisotropic electronic and thermal transport are thought to be beneficial for thermoelectric applications, while anisotropic mechanical properties…

Materials Science · Physics 2024-05-14 Yuchen Lou , Alex M. Ganose

Machine learning (ML) is becoming increasingly popular for predicting material properties to accelerate materials discovery. Because material properties are strongly affected by its crystal structure, a key issue is converting the crystal…

Materials Science · Physics 2023-10-12 Hirofumi Tsuruta , Yukari Katsura , Masaya Kumagai

Recent findings indicate that over-parametrization, while crucial for successfully training deep neural networks, also introduces large amounts of redundancy. Tensor methods have the potential to efficiently parametrize over-complete…

Computer Vision and Pattern Recognition · Computer Science 2019-04-05 Jean Kossaifi , Adrian Bulat , Georgios Tzimiropoulos , Maja Pantic

Understanding the relationship between atomic structure (order) and chemical composition (chemistry) is critical for advancing materials science, yet traditional spectroscopic techniques can be slow and damaging to sensitive samples.…

Materials Science · Physics 2025-08-29 Mridul Kumar , Yevgeny Rakita

The rapid development of 6G systems demands advanced technologies to boost network capacity and spectral efficiency, particularly in the context of intelligent reflecting surfaces (IRS)-aided millimeter-wave (mmWave) communications. A key…

Signal Processing · Electrical Eng. & Systems 2026-01-19 Xiaokun Tuo , Zijian Chen , Ming-Min Zhao , Changsheng You , Min-Jian Zhao
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