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Determining the different conformational states of a protein and the transition paths between them is key to fully understanding the relationship between biomolecular structure and function. This can be accomplished by sampling protein…

Biological Physics · Physics 2021-03-24 Venkata K. Ramaswamy , Chris G. Willcocks , Matteo T. Degiacomi

In this paper, we tackle the problem of detecting objects in 3D and forecasting their future motion in the context of self-driving. Towards this goal, we design a novel approach that explicitly takes into account the interactions between…

Computer Vision and Pattern Recognition · Computer Science 2020-08-14 Lingyun Luke Li , Bin Yang , Ming Liang , Wenyuan Zeng , Mengye Ren , Sean Segal , Raquel Urtasun

Semantic segmentation networks are usually pre-trained once and not updated during deployment. As a consequence, misclassifications commonly occur if the distribution of the training data deviates from the one encountered during the robot's…

Robotics · Computer Science 2023-02-15 Jonas Frey , Hermann Blum , Francesco Milano , Roland Siegwart , Cesar Cadena

The quality of data representation in deep learning methods is directly related to the prior model imposed on the representations; however, generally used fixed priors are not capable of adjusting to the context in the data. To address this…

Machine Learning · Computer Science 2013-03-18 Rakesh Chalasani , Jose C. Principe

Despite decades of research, understanding human manipulation activities is, and has always been, one of the most attractive and challenging research topics in computer vision and robotics. Recognition and prediction of observed human…

Computer Vision and Pattern Recognition · Computer Science 2021-10-27 Gamze Akyol , Sanem Sariel , Eren Erdal Aksoy

Predictive coding is a promising theoretical framework in neuroscience for understanding information transmission and perception. It posits that the brain perceives the external world through internal models and updates these models under…

Neurons and Cognition · Quantitative Biology 2022-09-07 Zhen-Ye Huang , Xin-Yi Fan , Jianwen Zhou , Hai-Jun Zhou

Transformers have achieved state-of-the-art performance in language modeling tasks. However, the reasons behind their tremendous success are still unclear. In this paper, towards a better understanding, we train a Transformer model on a…

Machine Learning · Statistics 2024-06-06 Michael E. Sander , Raja Giryes , Taiji Suzuki , Mathieu Blondel , Gabriel Peyré

The ability to predict the future is of great value for biological and artificial cognitive systems alike. However, successfully predicting the future typically requires maintaining a memory of the recent past. It is currently unclear how…

Neurons and Cognition · Quantitative Biology 2026-05-14 Antony W. N'dri , Thomas Barbier , Céline Teulière , Jochen Triesch

Object binding is a foundational process in visual cognition, during which low-level perceptual features are joined into object representations. Binding has been considered a fundamental challenge for neural networks, and a major milestone…

Computer Vision and Pattern Recognition · Computer Science 2026-04-14 Alexa R. Tartaglini , Michael A. Lepori

Recurrent feedback connections in the mammalian visual system have been hypothesized to play a role in synthesizing input in the theoretical framework of analysis by synthesis. The comparison of internally synthesized representation with…

Computer Vision and Pattern Recognition · Computer Science 2017-05-23 Hao Wang , Xingyu Lin , Yimeng Zhang , Tai Sing Lee

Machine understanding of complex images is a key goal of artificial intelligence. One challenge underlying this task is that visual scenes contain multiple inter-related objects, and that global context plays an important role in…

Machine Learning · Statistics 2018-11-05 Roei Herzig , Moshiko Raboh , Gal Chechik , Jonathan Berant , Amir Globerson

For energy-efficient computation in specialized neuromorphic hardware, we present spiking neural coding, an instantiation of a family of artificial neural models grounded in the theory of predictive coding. This model, the first of its…

Neural and Evolutionary Computing · Computer Science 2022-08-09 Alexander Ororbia

Learning graph representations is a fundamental task aimed at capturing various properties of graphs in vector space. The most recent methods learn such representations for static networks. However, real world networks evolve over time and…

Social and Information Networks · Computer Science 2019-08-22 Palash Goyal , Sujit Rokka Chhetri , Arquimedes Canedo

We present a simple, modular graph-based convolutional neural network that takes structural information from protein-ligand complexes as input to generate models for activity and binding mode prediction. Complex structures are generated by…

Biomolecules · Quantitative Biology 2020-02-26 Joseph A. Morrone , Jeffrey K. Weber , Tien Huynh , Heng Luo , Wendy D. Cornell

Temporal prediction is inherently uncertain, but representing the ambiguity in natural image sequences is a challenging high-dimensional probabilistic inference problem. For natural scenes, the curse of dimensionality renders explicit…

Computer Vision and Pattern Recognition · Computer Science 2024-11-05 Pierre-Étienne H. Fiquet , Eero P. Simoncelli

We investigate the mechanisms that arise when transformers are trained to solve arithmetic on sequences where tokens are variables whose meaning is determined only through their interactions in-context. While prior work has studied…

Computation and Language · Computer Science 2026-02-26 Eric Todd , Jannik Brinkmann , Rohit Gandikota , David Bau

Complex environments provide structured yet variable sensory inputs. To best exploit information from these environments, organisms must evolve the ability to anticipate consequences of unknown stimuli, and act on these predictions. We…

Neural and Evolutionary Computing · Computer Science 2019-07-16 Lana Sinapayen , Atsushi Masumori , Ikegami Takashi

In the near future, more and more machines will perform tasks in the vicinity of human spaces or support them directly in their spatially bound activities. In order to simplify the verbal communication and the interaction between robotic…

Machine Learning · Computer Science 2020-04-14 Sebastian Feld , Steffen Illium , Andreas Sedlmeier , Lenz Belzner

Self-attention-based networks have achieved remarkable performance in sequential recommendation tasks. A crucial component of these models is positional encoding. In this study, we delve into the learned positional embedding, demonstrating…

Information Retrieval · Computer Science 2024-11-27 Fan Luo , Haibo He , Juan Zhang , Shenghui Xu

The problem of predicting human motion given a sequence of past observations is at the core of many applications in robotics and computer vision. Current state-of-the-art formulate this problem as a sequence-to-sequence task, in which a…

Computer Vision and Pattern Recognition · Computer Science 2020-03-25 Enric Corona , Albert Pumarola , Guillem Alenyà , Francesc Moreno-Noguer