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Integrating the structural inductive biases of Graph Neural Networks (GNNs) with the global contextual modeling capabilities of Transformers represents a pivotal challenge in graph representation learning. While GNNs excel at capturing…

Machine Learning · Computer Science 2025-03-05 Zhihua Duan , Jialin Wang

Graph-RAG systems achieve strong multi-hop question answering by indexing documents into knowledge graphs, but strong retrieval does not guarantee strong answers. Evaluating KET-RAG, a leading Graph-RAG system, on three multi-hop QA…

Information Retrieval · Computer Science 2026-03-19 Yasaman Zarrinkia , Venkatesh Srinivasan , Alex Thomo

In decoder-only (causal) transformers, the computation graph created by causal masking routes information through both direct-path attention and indirect paths formed by intermediate tokens. We denote these indirect paths between token…

Machine Learning · Computer Science 2026-01-22 Hunjae Lee , Corey Clark

Using graph models with relational information in recommender systems has shown promising results. Yet, most methods are transductive, i.e., they are based on dimensionality reduction architectures. Hence, they require heavy retraining…

Information Retrieval · Computer Science 2022-09-14 Theis E. Jendal , Matteo Lissandrini , Peter Dolog , Katja Hose

Mechanistic interpretability typically relies on post-hoc analysis of trained networks. We instead adopt an interventional approach: testing hypotheses a priori by modifying architectural topology to observe training dynamics. We study…

Machine Learning · Computer Science 2026-05-05 Alper Yıldırım

Knowledge Graph Question Answering (KGQA) simplifies querying vast amounts of knowledge stored in a graph-based model using natural language. However, the research has largely concentrated on English, putting non-English speakers at a…

Computation and Language · Computer Science 2024-07-09 Nikit Srivastava , Mengshi Ma , Daniel Vollmers , Hamada Zahera , Diego Moussallem , Axel-Cyrille Ngonga Ngomo

The attention mechanism forms the foundational blocks for transformer language models. Recent approaches show that scaling the model achieves human-level performance. However, with increasing demands for scaling and constraints on hardware…

Computation and Language · Computer Science 2024-07-16 Sai Sena Chinnakonduru , Astarag Mohapatra

Question Answering (QA) is a task that entails reasoning over natural language contexts, and many relevant works augment language models (LMs) with graph neural networks (GNNs) to encode the Knowledge Graph (KG) information. However, most…

Computation and Language · Computer Science 2023-04-26 Jinyoung Park , Hyeong Kyu Choi , Juyeon Ko , Hyeonjin Park , Ji-Hoon Kim , Jisu Jeong , Kyungmin Kim , Hyunwoo J. Kim

While graph neural networks (GNNs) have gained popularity for learning circuit representations in various electronic design automation (EDA) tasks, they face challenges in scalability when applied to large graphs and exhibit limited…

Machine Learning · Computer Science 2024-04-12 Chenhui Deng , Zichao Yue , Cunxi Yu , Gokce Sarar , Ryan Carey , Rajeev Jain , Zhiru Zhang

While reasoning models are increasingly ubiquitous, the effects of reasoning training on a model's internal mechanisms remain poorly understood. In this work, we introduce transcoder adapters, a technique for learning an interpretable…

Machine Learning · Computer Science 2026-02-25 Nathan Hu , Jake Ward , Thomas Icard , Christopher Potts

Graph Transformers (GTs) have demonstrated their advantages across a wide range of tasks. However, the self-attention mechanism in GTs overlooks the graph's inductive biases, particularly biases related to structure, which are crucial for…

Machine Learning · Computer Science 2024-04-25 Chuang Liu , Zelin Yao , Yibing Zhan , Xueqi Ma , Shirui Pan , Wenbin Hu

Current deep learning approaches have shown good in-distribution generalization performance, but struggle with out-of-distribution generalization. This is especially true in the case of tasks involving abstract relations like recognizing…

Neural and Evolutionary Computing · Computer Science 2022-06-13 Giancarlo Kerg , Sarthak Mittal , David Rolnick , Yoshua Bengio , Blake Richards , Guillaume Lajoie

The ability to reason over learned knowledge is an innate ability for humans and humans can easily master new reasoning rules with only a few demonstrations. While most existing studies on knowledge graph (KG) reasoning assume enough…

Computation and Language · Computer Science 2019-08-15 Hong Wang , Wenhan Xiong , Mo Yu , Xiaoxiao Guo , Shiyu Chang , William Yang Wang

A long-term ambition of information seeking QA systems is to reason over multi-modal contexts and generate natural answers to user queries. Today, memory intensive pre-trained language models are adapted to downstream tasks such as QA by…

Computation and Language · Computer Science 2023-07-12 Vaishali Pal , Evangelos Kanoulas , Maarten de Rijke

Causal modeling provides us with powerful counterfactual reasoning and interventional mechanism to generate predictions and reason under various what-if scenarios. However, causal discovery using observation data remains a nontrivial task…

Machine Learning · Computer Science 2023-01-06 Jawad Chowdhury , Rezaur Rashid , Gabriel Terejanu

We investigate the scaling properties of implicit deductive reasoning over Horn clauses in depth-bounded Transformers. By systematically decorrelating provability from spurious features and enforcing algorithmic alignment, we find that in…

Artificial Intelligence · Computer Science 2026-05-07 Enrico Vompa , Tanel Tammet

Due to the concise and structured nature of tables, the knowledge contained therein may be incomplete or missing, posing a significant challenge for table question answering (TableQA) and data analysis systems. Most existing datasets either…

Computation and Language · Computer Science 2024-05-15 Mengkang Hu , Haoyu Dong , Ping Luo , Shi Han , Dongmei Zhang

Standard transformer architectures apply the same number of layers to every token regardless of contextual difficulty. We present Token-Selective Attention (TSA), a learned per-token gate on residual updates between consecutive transformer…

Machine Learning · Computer Science 2026-05-08 Ahmed Abdelmuniem Abdalla Mohammed

While transformers demonstrate impressive performance on many knowledge intensive (KI) tasks, their ability to serve as implicit knowledge bases (KBs) remains limited, as shown on several slot-filling, question-answering (QA), fact…

Computation and Language · Computer Science 2022-03-21 Nic Jedema , Thuy Vu , Manish Gupta , Alessandro Moschitti

Sparse attention has been claimed to increase model interpretability under the assumption that it highlights influential inputs. Yet the attention distribution is typically over representations internal to the model rather than the inputs…

Computation and Language · Computer Science 2021-06-09 Clara Meister , Stefan Lazov , Isabelle Augenstein , Ryan Cotterell