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Graph Retrieval-Augmented Generation (Graph RAG) effectively builds a knowledge graph (KG) to connect disparate facts across a large document corpus. However, this broad-view approach often lacks the deep structured reasoning needed for…

Computation and Language · Computer Science 2025-10-27 Jiaoyang Li , Junhao Ruan , Shengwei Tang , Saihan Chen , Kaiyan Chang , Yuan Ge , Tong Xiao , Jingbo Zhu

Transformer-based models have become state-of-the-art tools in various machine learning tasks, including time series classification, yet their complexity makes understanding their internal decision-making challenging. Existing…

Machine Learning · Computer Science 2025-11-27 Matīss Kalnāre , Sofoklis Kitharidis , Thomas Bäck , Niki van Stein

We study how reliably sparse autoencoders (SAEs) support claims about reasoning-related internal features in large language models. We first give a stylized analysis showing that sparsity-regularized decoding can preferentially retain…

Machine Learning · Computer Science 2026-05-19 George Ma , Zhongyuan Liang , Irene Y. Chen , Somayeh Sojoudi

Understanding reasoning in large language models is complicated by evaluations that conflate multiple reasoning types. We isolate analogical reasoning, where a model transfers an attribute between entities that share known properties, and…

Computation and Language · Computer Science 2026-05-26 Ruichen Xu , Wenjing Yan , Ying-Jun Angela Zhang

Transformers achieve strong performance across diverse domains but implicitly assume Euclidean geometry in their attention mechanisms, limiting their effectiveness on data with non-Euclidean structure. While recent extensions to hyperbolic…

Machine Learning · Computer Science 2025-10-03 Ryan Y. Lin , Siddhartha Ojha , Nicholas Bai

Medical Visual Question Answering (MedVQA) aims to answer medical questions according to medical images. However, the complexity of medical data leads to confounders that are difficult to observe, so bias between images and questions is…

Computer Vision and Pattern Recognition · Computer Science 2026-03-27 Zibo Xu , Qiang Li , Weizhi Nie , Weijie Wang , Anan Liu

Multimodal knowledge graphs (MKGs), which intuitively organize information in various modalities, can benefit multiple practical downstream tasks, such as recommendation systems, and visual question answering. However, most MKGs are still…

Artificial Intelligence · Computer Science 2023-07-10 Ke Liang , Sihang Zhou , Yue Liu , Lingyuan Meng , Meng Liu , Xinwang Liu

Large language models (LLMs) still struggle with multi-hop reasoning over knowledge-graphs (KGs), and we identify a previously overlooked structural reason for this difficulty: Transformer attention heads naturally specialize in distinct…

Computation and Language · Computer Science 2026-04-15 Jinliang Liu , Jiale Bai , Shaoning Zeng

Attention mechanisms have become ubiquitous in NLP. Recent architectures, notably the Transformer, learn powerful context-aware word representations through layered, multi-headed attention. The multiple heads learn diverse types of word…

Computation and Language · Computer Science 2019-09-09 Gonçalo M. Correia , Vlad Niculae , André F. T. Martins

Question Answering over Knowledge Graph (KGQA) aims to seek answer entities for the natural language question from a large-scale Knowledge Graph~(KG). To better perform reasoning on KG, recent work typically adopts a pre-trained language…

Computation and Language · Computer Science 2024-01-02 Jinhao Jiang , Kun Zhou , Wayne Xin Zhao , Yaliang Li , Ji-Rong Wen

Multi-hop question answering over hybrid table-text data requires retrieving and reasoning across multiple evidence pieces from large corpora, but standard Retrieval-Augmented Generation (RAG) pipelines process documents as flat ranked…

Computation and Language · Computer Science 2026-01-13 Mohamed Sharafath , Aravindh Annamalai , Ganesh Murugan , Aravindakumar Venugopalan

Despite that going deep has proven successful in many neural architectures, the existing graph transformers are relatively shallow. In this work, we explore whether more layers are beneficial to graph transformers, and find that current…

Machine Learning · Computer Science 2023-03-02 Haiteng Zhao , Shuming Ma , Dongdong Zhang , Zhi-Hong Deng , Furu Wei

Despite remarkable advances, large language models often fail at compositional reasoning tasks, a phenomenon exemplified by the ``curse of two-hop reasoning''. This paper introduces the Identity Bridge, a simple yet powerful mechanism that…

Machine Learning · Computer Science 2025-09-30 Pengxiao Lin , Zheng-An Chen , Zhi-Qin John Xu

Transformer-based language models display impressive reasoning-like behavior, yet remain brittle on tasks that require stable symbolic manipulation. This paper develops a unified perspective on these phenomena by interpreting self-attention…

Artificial Intelligence · Computer Science 2025-12-18 Sahil Rajesh Dhayalkar

Relation prediction for knowledge graphs aims at predicting missing relationships between entities. Despite the importance of inductive relation prediction, most previous works are limited to a transductive setting and cannot process…

Artificial Intelligence · Computer Science 2021-07-27 Sijie Mai , Shuangjia Zheng , Yuedong Yang , Haifeng Hu

Reading comprehension QA tasks have seen a recent surge in popularity, yet most works have focused on fact-finding extractive QA. We instead focus on a more challenging multi-hop generative task (NarrativeQA), which requires the model to…

Computation and Language · Computer Science 2019-06-04 Lisa Bauer , Yicheng Wang , Mohit Bansal

This study utilizes community structures to address node degree biases in message-passing (MP) via learnable graph augmentations and novel graph transformers. Recent augmentation-based methods showed that MP neural networks often perform…

Machine Learning · Computer Science 2023-12-29 Van Thuy Hoang , O-Joun Lee

Language models are increasingly capable, yet still fail at a seemingly simple task of multi-digit multiplication. In this work, we study why, by reverse-engineering a model that successfully learns multiplication via \emph{implicit…

Machine Learning · Computer Science 2025-10-02 Xiaoyan Bai , Itamar Pres , Yuntian Deng , Chenhao Tan , Stuart Shieber , Fernanda Viégas , Martin Wattenberg , Andrew Lee

Deep neural networks do not discriminate between spurious and causal patterns, and will only learn the most predictive ones while ignoring the others. This shortcut learning behaviour is detrimental to a network's ability to generalize to…

Machine Learning · Computer Science 2023-01-11 Thomas Duboudin , Emmanuel Dellandréa , Corentin Abgrall , Gilles Hénaff , Liming Chen

Knowledge Graphs are a widely used method to represent relations between entities in various AI applications, and Graph Embedding has rapidly become a standard technique to represent Knowledge Graphs in such a way as to facilitate…

Machine Learning · Computer Science 2023-11-02 Zhijin Guo , Zhaozhen Xu , Martha Lewis , Nello Cristianini
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