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Graph Neural Networks (GNNs) are powerful to learn the representation of graph-structured data. Most of the GNNs use the message-passing scheme, where the embedding of a node is iteratively updated by aggregating the information of its…

Machine Learning · Computer Science 2020-07-28 Shuo Zhang , Lei Xie

Transformers have recently shown promise for medical image applications, leading to an increasing interest in developing such models for medical image registration. Recent advancements in designing registration Transformers have focused on…

Image and Video Processing · Electrical Eng. & Systems 2023-03-14 Junyu Chen , Yihao Liu , Yufan He , Yong Du

Aggregating multi-modality data to obtain reliable data representation attracts more and more attention. Recent studies demonstrate that Transformer models usually work well for multi-modality tasks. Existing Transformers generally either…

Computer Vision and Pattern Recognition · Computer Science 2023-03-17 Xixi Wang , Xiao Wang , Bo Jiang , Jin Tang , Bin Luo

Characteristics such as low contrast and significant organ shape variations are often exhibited in medical images. The improvement of segmentation performance in medical imaging is limited by the generally insufficient adaptive capabilities…

Image and Video Processing · Electrical Eng. & Systems 2023-06-09 Hejun Huang , Zuguo Chen , Ying Zou , Ming Lu , Chaoyang Chen

Hypergraphs provide a robust framework for modeling complex systems with higher-order interactions. However, analyzing them in dynamic settings presents significant computational challenges. To address this, we introduce a novel method that…

Social and Information Networks · Computer Science 2024-10-15 Hiroki Matsumoto , Takahiro Yoshida , Ryoma Kondo , Ryohei Hisano

Linear attention has emerged as a promising alternative to softmax-based attention, leveraging kernelized feature maps to reduce complexity from quadratic to linear in sequence length. However, the non-negative constraint on feature maps…

Computer Vision and Pattern Recognition · Computer Science 2025-03-05 Weikang Meng , Yadan Luo , Xin Li , Dongmei Jiang , Zheng Zhang

Predicting physical properties of materials from their crystal structures is a fundamental problem in materials science. In peripheral areas such as the prediction of molecular properties, fully connected attention networks have been shown…

Machine Learning · Computer Science 2024-03-19 Tatsunori Taniai , Ryo Igarashi , Yuta Suzuki , Naoya Chiba , Kotaro Saito , Yoshitaka Ushiku , Kanta Ono

Transformers have been extensively studied in medical image segmentation to build pairwise long-range dependence. Yet, relatively limited well-annotated medical image data makes transformers struggle to extract diverse global features,…

Image and Video Processing · Electrical Eng. & Systems 2023-09-13 Xian Lin , Zengqiang Yan , Xianbo Deng , Chuansheng Zheng , Li Yu

Online continual learning for image classification is crucial for models to adapt to new data while retaining knowledge of previously learned tasks. This capability is essential to address real-world challenges involving dynamic…

Computer Vision and Pattern Recognition · Computer Science 2025-02-14 Adjovi Sim , Zhengkui Wang , Aik Beng Ng , Shalini De Mello , Simon See , Wonmin Byeon

Graph transformer has been proven as an effective graph learning method for its adoption of attention mechanism that is capable of capturing expressive representations from complex topological and feature information of graphs. Graph…

Machine Learning · Computer Science 2024-03-26 Dongqi Fu , Zhigang Hua , Yan Xie , Jin Fang , Si Zhang , Kaan Sancak , Hao Wu , Andrey Malevich , Jingrui He , Bo Long

Transformers, adapted from natural language processing, are emerging as a leading approach for graph representation learning. Contemporary graph transformers often treat nodes or edges as separate tokens. This approach leads to…

Machine Learning · Computer Science 2023-10-04 Zihan Pengmei , Zimu Li , Chih-chan Tien , Risi Kondor , Aaron R. Dinner

Knowledge graph reasoning plays a vital role in various applications and has garnered considerable attention. Recently, path-based methods have achieved impressive performance. However, they may face limitations stemming from constraints in…

Artificial Intelligence · Computer Science 2024-12-18 Junnan Liu , Qianren Mao , Weifeng Jiang , Jianxin Li

Medical image segmentation plays an important role in computer-aided diagnosis. Existing methods mainly utilize spatial attention to highlight the region of interest. However, due to limitations of medical imaging devices, medical images…

Computer Vision and Pattern Recognition · Computer Science 2025-07-17 Jiaxuan Li , Qing Xu , Xiangjian He , Ziyu Liu , Daokun Zhang , Ruili Wang , Rong Qu , Guoping Qiu

Drug-target binding affinity prediction plays an important role in the early stages of drug discovery, which can infer the strength of interactions between new drugs and new targets. However, the performance of previous computational models…

Machine Learning · Computer Science 2023-07-19 Xinxing Yang , Genke Yang , Jian Chu

Graph Transformers typically rely on explicit positional or structural encodings and dense global attention to incorporate graph topology. In this work, we show that neither is essential. We introduce HopFormer, a graph Transformer that…

Machine Learning · Computer Science 2026-02-03 Sanggeon Yun , Raheeb Hassan , Ryozo Masukawa , Sungheon Jeong , Mohsen Imani

Learning representations on large-sized graphs is a long-standing challenge due to the inter-dependence nature involved in massive data points. Transformers, as an emerging class of foundation encoders for graph-structured data, have shown…

Machine Learning · Computer Science 2024-08-19 Qitian Wu , Wentao Zhao , Chenxiao Yang , Hengrui Zhang , Fan Nie , Haitian Jiang , Yatao Bian , Junchi Yan

Cardinality estimation is a fundamental functionality in database systems. Most existing cardinality estimators focus on handling predicates over numeric or categorical data. They have largely omitted an important data type, set-valued…

Databases · Computer Science 2025-03-20 Yufan Sheng , Xin Cao , Kaiqi Zhao , Yixiang Fang , Jianzhong Qi , Wenjie Zhang , Christian S. Jensen

We introduce a novel self-attention mechanism, which we call CSA (Chromatic Self-Attention), which extends the notion of attention scores to attention _filters_, independently modulating the feature channels. We showcase CSA in a…

Machine Learning · Computer Science 2023-04-24 Romain Menegaux , Emmanuel Jehanno , Margot Selosse , Julien Mairal

In medical image segmentation, specialized computer vision techniques, notably transformers grounded in attention mechanisms and residual networks employing skip connections, have been instrumental in advancing performance. Nonetheless,…

Computer Vision and Pattern Recognition · Computer Science 2026-05-26 Fuchen Zheng , Xuhang Chen , Weihuang Liu , Haolun Li , Yingtie Lei , Jiahui He , Chi-Man Pun , Shounjun Zhou

Linear attention mechanisms have emerged as efficient alternatives to full self-attention in Graph Transformers, offering linear time complexity. However, existing linear attention models often suffer from a significant drop in…

Computer Vision and Pattern Recognition · Computer Science 2026-01-29 Zhaolin Hu , Kun Li , Hehe Fan , Yi Yang
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