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This paper introduces diffusion protein language model (DPLM), a versatile protein language model that demonstrates strong generative and predictive capabilities for protein sequences. We first pre-train scalable DPLMs from…

Machine Learning · Computer Science 2024-10-17 Xinyou Wang , Zaixiang Zheng , Fei Ye , Dongyu Xue , Shujian Huang , Quanquan Gu

Optimizing discrete diffusion model (DDM) with rewards remains a challenge: the non-autoregressive paradigm makes importance sampling intractable and rollout complex, puzzling reinforcement learning methods such as Group Relative Policy…

Artificial Intelligence · Computer Science 2025-10-06 Tianren Ma , Mu Zhang , Yibing Wang , Qixiang Ye

We present \textbf{LLaDA-o}, an effective and length-adaptive omni diffusion model for multimodal understanding and generation. LLaDA-o is built on a Mixture of Diffusion (MoD) framework that decouples discrete masked diffusion for text…

Computer Vision and Pattern Recognition · Computer Science 2026-03-03 Zebin You , Xiaolu Zhang , Jun Zhou , Chongxuan Li , Ji-Rong Wen

The discovery and study of new material systems rely on molecular simulations that often come with significant computational expense. We propose MDDM, a Molecular Dynamics Diffusion Model, which is capable of predicting a valid output…

Machine Learning · Computer Science 2025-09-11 Kevin Ferguson , Yu-hsuan Chen , Levent Burak Kara

A possible explanation for the impressive performance of masked language model (MLM) pre-training is that such models have learned to represent the syntactic structures prevalent in classical NLP pipelines. In this paper, we propose a…

Computation and Language · Computer Science 2021-09-13 Koustuv Sinha , Robin Jia , Dieuwke Hupkes , Joelle Pineau , Adina Williams , Douwe Kiela

Multi-modal data-sets are ubiquitous in modern applications, and multi-modal Variational Autoencoders are a popular family of models that aim to learn a joint representation of the different modalities. However, existing approaches suffer…

Machine Learning · Computer Science 2023-12-19 Mustapha Bounoua , Giulio Franzese , Pietro Michiardi

Out-of-distribution (OOD) detection is essential for reliable and trustworthy machine learning. Recent multi-modal OOD detection leverages textual information from in-distribution (ID) class names for visual OOD detection, yet it currently…

Computation and Language · Computer Science 2023-10-13 Yi Dai , Hao Lang , Kaisheng Zeng , Fei Huang , Yongbin Li

Masked Diffusion Models (MDMs) provide an efficient non-causal alternative to autoregressive generation but often struggle with token dependencies and semantic incoherence due to their reliance on discrete marginal distributions. We address…

Computation and Language · Computer Science 2026-04-20 Roy Uziel , Omer Belhasin , Itay Levy , Akhiad Bercovich , Ran El-Yaniv , Ran Zilberstein , Michael Elad

Diffusion language models have recently emerged as a leading alternative to standard language models, due to their ability for bidirectional attention and parallel text generation. In this work, we explore variants for their use in speech…

Computation and Language · Computer Science 2026-04-30 Davyd Naveriani , Albert Zeyer , Ralf Schlüter , Hermann Ney

We present DiffusionBERT, a new generative masked language model based on discrete diffusion models. Diffusion models and many pre-trained language models have a shared training objective, i.e., denoising, making it possible to combine the…

Computation and Language · Computer Science 2022-12-02 Zhengfu He , Tianxiang Sun , Kuanning Wang , Xuanjing Huang , Xipeng Qiu

Autoregressive language models decode left-to-right with irreversible commitments, limiting revision during multi-step reasoning. We propose \textbf{VDLM}, a modular variable diffusion language model that separates semantic planning from…

Computation and Language · Computer Science 2026-02-19 Shuhui Qu

Diffusion language models (dLMs) have emerged as a promising paradigm that enables parallel, non-autoregressive generation, but their learning efficiency lags behind that of autoregressive (AR) language models when trained from scratch. To…

Diffusion models have demonstrated strong potential in language modeling, offering various advantages over traditional autoregressive approaches. Their ability to generate and revise entire responses in parallel enables faster generation…

Machine Learning · Computer Science 2026-03-03 Michael Hersche , Samuel Moor-Smith , Thomas Hofmann , Abbas Rahimi

Masked language model and autoregressive language model are two types of language models. While pretrained masked language models such as BERT overwhelm the line of natural language understanding (NLU) tasks, autoregressive language models…

Computation and Language · Computer Science 2020-04-27 Yi Liao , Xin Jiang , Qun Liu

When Masked Diffusion Models (MDMs) generate sequences through iterative refinement, the rich internal computation over masked positions is discarded, forcing every subsequent refinement step to recompute the valuable internal information…

Current SMILES-based diffusion models for molecule generation typically support only unimodal constraint. They inject conditioning signals at the start of the training process and require retraining a new model from scratch whenever the…

Machine Learning · Computer Science 2025-08-21 Yunzhe Zhang , Yifei Wang , Khanh Vinh Nguyen , Pengyu Hong

While diffusion models excel at generating high-quality images, prior work reports a significant performance gap between diffusion and autoregressive (AR) methods in language modeling. In this work, we show that simple masked discrete…

Masked diffusion models have recently emerged as a flexible framework for discrete generative modeling. However, a key limitation of standard masked diffusion is its inability to effectively capture dependencies among tokens that are…

Machine Learning · Computer Science 2025-10-28 Yichi Zhang , Alex Schwing , Zhizhen Zhao

Diffusion language models promise parallel generation, yet still lag behind autoregressive (AR) models in quality. We stem this gap to a failure of introspective consistency: AR models agree with their own generations, while DLMs often do…

Diffusion Language Models (DLMs) present a compelling alternative to autoregressive models, offering flexible, any-order infilling without specialized prompting design. However, their practical utility is blocked by a critical limitation:…

Computation and Language · Computer Science 2026-02-03 Zirui Wu , Lin Zheng , Zhihui Xie , Jiacheng Ye , Jiahui Gao , Shansan Gong , Yansong Feng , Zhenguo Li , Wei Bi , Guorui Zhou , Lingpeng Kong