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Feature selection is one of the most fundamental problems in machine learning. An extensive body of work on information-theoretic feature selection exists which is based on maximizing mutual information between subsets of features and class…

Machine Learning · Statistics 2016-06-10 Shuyang Gao , Greg Ver Steeg , Aram Galstyan

Estimation of the Fisher Information Metric (FIM-estimation) is an important task that arises in unsupervised learning of phase transitions, a problem proposed by physicists. This work completes the definition of the task by defining…

Machine Learning · Computer Science 2024-08-07 Victor Kasatkin , Evgeny Mozgunov , Nicholas Ezzell , Utkarsh Mishra , Itay Hen , Daniel Lidar

The Landau description of phase transitions relies on the identification of a local order parameter that indicates the onset of a symmetry-breaking phase. In contrast, topological phase transitions evade this paradigm and, as a result, are…

Statistical Mechanics · Physics 2020-06-24 Joaquin F. Rodriguez-Nieva , Mathias S. Scheurer

Many datasets are underspecified: there exist multiple equally viable solutions to a given task. Underspecification can be problematic for methods that learn a single hypothesis because different functions that achieve low training loss can…

Machine Learning · Computer Science 2023-02-22 Yoonho Lee , Huaxiu Yao , Chelsea Finn

Secondary structure elements of many protein families exhibit differential conservation on their opposing faces. Amphipathic helices and beta-sheets by definition possess this property, and play crucial functional roles. This type of…

Biomolecules · Quantitative Biology 2007-05-23 Ashok Palaniappan

Biomedical data are widely accepted in developing prediction models for identifying a specific tumor, drug discovery and classification of human cancers. However, previous studies usually focused on different classifiers, and overlook the…

Quantitative Methods · Quantitative Biology 2019-11-05 Shigang Liu , Jun Zhang , Yang Xiang , Wanlei Zhou , Dongxi Xiang

Feature selection technology is a key technology of data dimensionality reduction. Becauseof the lack of label information of collected data samples, unsupervised feature selection has attracted more attention. The universality and…

Machine Learning · Computer Science 2024-10-22 Xiaolin Lv , Liang Du , Peng Zhou , Peng Wu

Variable selection in high-dimensional space characterizes many contemporary problems in scientific discovery and decision making. Many frequently-used techniques are based on independence screening; examples include correlation ranking…

Methodology · Statistics 2008-12-18 Jianqing Fan , Richard Samworth , Yichao Wu

Recent work has demonstrated the ability to leverage or distill pre-trained 2D features obtained using large pre-trained 2D models into 3D features, enabling impressive 3D editing and understanding capabilities using only 2D supervision.…

Computer Vision and Pattern Recognition · Computer Science 2025-02-21 Yoel Levy , David Shavin , Itai Lang , Sagie Benaim

Phases with distinct thermodynamic properties must differ in their underlying distributions of microscopic structures. While ordered phases are readily distinguished by unit cells and space groups, the local structural basis differentiating…

The all-relevant problem of feature selection is the identification of all strongly and weakly relevant attributes. This problem is especially hard to solve for time series classification and regression in industrial applications such as…

Machine Learning · Computer Science 2017-05-23 Maximilian Christ , Andreas W. Kempa-Liehr , Michael Feindt

Feature selection aims to select the smallest feature subset that yields the minimum generalization error. In the rich literature in feature selection, information theory-based approaches seek a subset of features such that the mutual…

Computer Vision and Pattern Recognition · Computer Science 2019-01-30 Shujian Yu , Jose C. Principe

AI for Science (AI4Science) workflows often treat the released dataset as a fixed interface to the underlying system. However, in domains relying on \emph{indirect observation}, the learner observes a derivative representation produced by…

Machine Learning · Computer Science 2026-05-26 Ling Zhan , Xiaoyao Yu , Tao Jia

The ability to classify images is dependent on having access to large labeled datasets and testing on data from the same domain that the model can train on. Classification becomes more challenging when dealing with new data from a different…

Computer Vision and Pattern Recognition · Computer Science 2023-10-20 Firas Al-Hindawi , Md Mahfuzur Rahman Siddiquee , Teresa Wu , Han Hu , Ying Sun

The integration of artificial intelligence (AI) into fundamental science has opened new possibilities to address long-standing scientific challenges rooted in mathematical limitations. For example, topological invariants are used to…

Mesoscale and Nanoscale Physics · Physics 2025-11-18 Yang Long , Haoran Xue , Baile Zhang

Machine learning methods are used to discover complex nonlinear relationships in biological and medical data. However, sophisticated learning models are computationally unfeasible for data with millions of features. Here we introduce the…

The identification and classification of transitions in topological and microstructural regimes in pattern-forming processes are critical for understanding and fabricating microstructurally precise novel materials in many application…

Materials Science · Physics 2022-08-12 Marcin Abram , Keith Burghardt , Greg Ver Steeg , Aram Galstyan , Remi Dingreville

We introduce a methodology for performing parameter inference in high-dimensional, non-linear diffusion processes. We illustrate its applicability for obtaining insights into the evolution of and relationships between species, including…

Machine Learning · Statistics 2024-11-15 Nicklas Boserup , Gefan Yang , Michael Lind Severinsen , Christy Anna Hipsley , Stefan Sommer

In classical statistics, the bias-variance trade-off describes how varying a model's complexity (e.g., number of fit parameters) affects its ability to make accurate predictions. According to this trade-off, optimal performance is achieved…

Machine Learning · Statistics 2022-08-05 Jason W. Rocks , Pankaj Mehta

How and where proteins interface with one another can ultimately impact the proteins' functions along with a range of other biological processes. As such, precise computational methods for protein interface prediction (PIP) come highly…

Quantitative Methods · Quantitative Biology 2021-10-08 Alex Morehead , Chen Chen , Ada Sedova , Jianlin Cheng
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