Related papers: High-precision Dynamic Monte Carlo Study of Rigidi…
In dynamical percolation, the status of every bond is refreshed according to an independent Poisson clock. For graphs which do not percolate at criticality, the dynamical sensitivity of this property was analyzed extensively in the last…
Functional structures from across the engineered and biological world combine rigid elements such as bones and columns with flexible ones such as cables, fibers and membranes. These structures are known loosely as tensegrities, since these…
We present computer simulations of a dynamic Monte Carlo algorithm for polymer chains on the FCC lattice which takes explicitly into account the possibility to overcome topological constraints by controlling the rate at which nearby polymer…
A wide variety of methods have been used to compute percolation thresholds. In lattice percolation, the most powerful of these methods consists of microcanonical simulations using the union-find algorithm to efficiently determine the…
We propose a new Monte Carlo scheme to study the late-time dynamics of a 2-dim hard sphere fluid, modeled by a tethered network of hard spheres. Fluidity is simulated by breaking and reattaching the flexible tethers. We study the diffusion…
An off-lattice Monte Carlo algorithm for solutions of equilibrium polymers (EP) is proposed. At low and moderate densities this is shown to reproduce faithfully the (static) properties found recently for flexible linear EP using a lattice…
We present a systematic analysis of statistical properties of turbulent current and vorticity structures at a given time using cluster analysis. The data stems from numerical simulations of decaying three-dimensional (3D)…
Shear thickening suspensions of non-Brownian polydisperse particles are simulated in 2D using a discrete element method based algorithm (LF-DEM) at high packing fractions ($\phi$) and large non-dimensional stresses ($\sigma$). Rigidity…
We present a fine-grained approach to identify clusters and perform percolation analysis in a 2D lattice system. In our approach, we develop an algorithm based on the linked-list data structure whereby the members of a cluster are nodes of…
The (1+1)-dimensional kinetic model of crystal growth with simulated self-attraction and random sequential or parallel dynamics is introduced and studied via Monte-Carlo simulations. To imitate the attraction of absorbing atoms the…
Merging galaxy clusters have become one of the most important probes of dark matter, providing evidence for dark matter over modified gravity and even constraints on the dark matter self-interaction cross-section. To properly constrain the…
Disk vortices have been heralded as promising routes for planet formation due to their ability to trap significant amounts of pebbles. While the gas motions and trapping properties of two-dimensional vortices have been studied in enough…
We study bond percolation on the simple cubic (SC) lattice with various combinations of first, second, third, and fourth nearest-neighbors by Monte Carlo simulation. Using a single-cluster growth algorithm, we find precise values of the…
The asymptotic behavior of the percolation threshold $p_c$ and its dependence upon coordination number $z$ is investigated for both site and bond percolation on four-dimensional lattices with compact extended neighborhoods. Simple…
The study of the Ising model from a percolation perspective has played a significant role in the modern theory of critical phenomena. We consider the celebrated square-lattice Ising model and construct percolation clusters by placing bonds,…
Rigidity analysis using the "pebble game" can usefully be applied to protein crystal structures to obtain information on protein folding, assembly and the structure-function relationship. However, previous work using this technique has not…
The site percolation on the triangular lattice stands out as one of the few exactly solved statistical systems. By initially configuring critical percolation clusters of this model and randomly reassigning the color of each percolation…
We present a Monte Carlo study of the bond and site directed (oriented) percolation models in $(d+1)$ dimensions on simple-cubic and body-centered-cubic lattices, with $2 \leq d \leq 7$. A dimensionless ratio is defined, and an analysis of…
To establish the bond-site duality of explosive percolations in 2 dimension, the site and bond explosive percolation models are carefully defined on a square lattice. By studying the cluster distribution function and the behavior of the…
Random sequential adsorption of binary mixtures of extended objects on a two-dimensional triangular lattice is studied numerically by means of Monte Carlo simulations. The depositing objects are formed by self-avoiding random walks on the…