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The SunPy Project is a community of scientists and software developers creating an ecosystem of Python packages for solar physics. The project includes the sunpy core package as well as a set of affiliated packages. The sunpy core package…

Synchrotron processes, the radiative processes associated with the interaction of energetic charged particles with magnetic field, are of interest in many areas in astronomy, from the interstellar medium to extreme environments near compact…

Medical image analysis plays a key role in precision medicine as it allows the clinicians to identify anatomical abnormalities and it is routinely used in clinical assessment. Data curation and pre-processing of medical images are critical…

Image and Video Processing · Electrical Eng. & Systems 2024-07-19 Sergey Primakov , Elizaveta Lavrova , Zohaib Salahuddin , Henry C Woodruff , Philippe Lambin

Bodge is a free and open-source Python package for constructing large-scale real-space tight-binding models for calculations in condensed matter physics. "Large-scale" means that it should remain performant even for lattices with millions…

Superconductivity · Physics 2024-10-14 Jabir Ali Ouassou

CTLearn is a new Python package under development that uses the deep learning technique to analyze data from imaging atmospheric Cherenkov telescope (IACT) arrays. IACTs use the Cherenkov light emitted from air showers, initiated by…

Instrumentation and Methods for Astrophysics · Physics 2019-12-23 D. Nieto , A. Brill , Q. Feng , T. B. Humensky , B. Kim , T. Miener , R. Mukherjee , J. Sevilla

The Montage image mosaic engine has found wide applicability in astronomy research, integration into processing environments, and is an examplar application for the development of advanced cyber-infrastructure. It is written in C to provide…

Instrumentation and Methods for Astrophysics · Physics 2019-08-27 John Good , G. Bruce Berriman

We present a description of "the Conductor", an automated software package which handles all observations at the first Stellar Observations Network Group (SONG) node telescope at the Teide Observatory on the island of Tenerife. The idea was…

Instrumentation and Methods for Astrophysics · Physics 2019-03-06 M. Fredslund Andersen , R. Handberg , E. Weiss , S. Frandsen , S. Simón-Díaz , F. Grundahl , P. Pallé

The ThEdu series pursues the smooth transition from an intuitive way of doing mathematics at secondary school to a more formal approach to the subject in STEM education, while favouring software support for this transition by exploiting the…

Logic in Computer Science · Computer Science 2024-04-08 Julien Narboux , Walther Neuper , Pedro Quaresma

emcee is a Python library implementing a class of affine-invariant ensemble samplers for Markov chain Monte Carlo (MCMC). This package has been widely applied to probabilistic modeling problems in astrophysics where it was originally…

This manual accompanies the release of the particle data for 24 simulations of the EAGLE suite of cosmological hydrodynamical simulations of galaxy formation by the virgo consortium. It describes how to download these snapshots and how to…

Astrophysics of Galaxies · Physics 2017-07-03 The EAGLE team

Trajectories, sequentially measured quantities that form a path, are an important presence in many different fields, from hadronic beams in physics to electrocardiograms in medicine. Trajectory anal-ysis requires the quantification and…

Quantitative Methods · Quantitative Biology 2023-08-23 Maurício Moreira-Soares , Eduardo Mossmann , Rui D. M. Travasso , José Rafael Bordin

The convergence between astronomy and data sonification represents a significant advancement in the approach and analysis of cosmic information. By surpassing the visual exclusivity in data analysis in astronomy, innovative projects have…

Instrumentation and Methods for Astrophysics · Physics 2024-05-13 Natasha Bertaina Lucero , Johanna Casado , Beatriz García , Gonzalo Cayo

We present the pulsar_spectra software repository, an open-source pulsar flux density catalogue and automated spectral fitting software that finds the best spectral model and produces publication-quality plots. The Python-based software…

High Energy Astrophysical Phenomena · Physics 2022-11-09 N. A. Swainston , C. P. Lee , S. J. McSweeney , N. D. R. Bhat

ruptures is a Python library for offline change point detection. This package provides methods for the analysis and segmentation of non-stationary signals. Implemented algorithms include exact and approximate detection for various…

Computation · Statistics 2018-01-04 Charles Truong , Laurent Oudre , Nicolas Vayatis

Smokescreen is an open-source Python library for data-vector concealment (blinding) in cosmological analyses. Data-vector blinding works by applying cosmology-dependent shifts to the observed data vector, moving it away from the true…

Reduze is a computer program for reducing Feynman Integrals to master integrals employing a Laporta algorithm. The program is written in C++ and uses classes provided by the GiNaC library to perform the simplifications of the algebraic…

Computational Physics · Physics 2014-11-20 C. Studerus

Since Lorenz's seminal work on a simplified weather model, the numerical analysis of nonlinear dynamical systems has become one of the main subjects of research in physics. Despite of that, there remains a need for accessible, efficient,…

In the past decade imaging atmospheric Cherenkov telescope arrays such as H.E.S.S., MAGIC, VERITAS, as well as the Fermi-LAT space telescope have provided us with detailed images and spectra of the gamma-ray universe for the first time.…

Instrumentation and Methods for Astrophysics · Physics 2015-10-07 Axel Donath , Christoph Deil , Manuel Paz Arribas , Johannes King , Ellis Owen , Régis Terrier , Ignasi Reichardt , Jon Harris , Rolf Bühler , Stefan Klepser

This paper introduces pyRDF2Vec, a Python software package that reimplements the well-known RDF2Vec algorithm along with several of its extensions. By making the algorithm available in the most popular data science language, and by bundling…

Machine Learning · Computer Science 2022-05-06 Gilles Vandewiele , Bram Steenwinckel , Terencio Agozzino , Femke Ongenae

We present an open source Python 3 library aimed at practitioners of molecular simulation, especially Monte Carlo simulation. The aims of the library are to facilitate the generation of simulation data for a wide range of problems; and to…

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