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Networks are often characterized by node heterogeneity for which nodes exhibit different degrees of interaction and link homophily for which nodes sharing common features tend to associate with each other. In this paper, we propose a new…

Methodology · Statistics 2018-03-13 Ting Yan , Binyan Jiang , Stephen E. Fienberg , Chenlei Leng

Network embedding is a fervid topic in current networks science and observes that most real complex systems can be embedded in hidden metrics space and emerge as the geometrical property, where the geometric distance between nodes…

Physics and Society · Physics 2020-04-28 Zongning Wu , Zengru Di , Ying Fan

Graph neural network, as a powerful graph representation technique based on deep learning, has shown superior performance and attracted considerable research interest. However, it has not been fully considered in graph neural network for…

Social and Information Networks · Computer Science 2021-01-21 Xiao Wang , Houye Ji , Chuan Shi , Bai Wang , Peng Cui , P. Yu , Yanfang Ye

Correlations are known to play a crucial role in determining the structure of complex networks. Here we study how their presence affects the computation of the percolation threshold in random hypergraphs. In order to mimic the correlation…

Disordered Systems and Neural Networks · Physics 2009-07-20 Serena Bradde , Ginestra Bianconi

Knowledge hypergraphs generalize knowledge graphs using hyperedges to connect multiple entities and depict complicated relations. Existing methods either transform hyperedges into an easier-to-handle set of binary relations or view…

Machine Learning · Computer Science 2024-12-18 Mengfan Li , Xuanhua Shi , Chenqi Qiao , Teng Zhang , Hai Jin

We introduce a formalism for computing bond percolation properties of a class of correlated and clustered random graphs. This class of graphs is a generalization of the Configuration Model where nodes of different types are connected via…

Statistical Mechanics · Physics 2017-10-06 Antoine Allard , Laurent Hébert-Dufresne , Pierre-André Noël , Vincent Marceau , Louis J. Dubé

Random graph models have been instrumental in characterizing complex networks, but chemical reaction networks (CRNs) are better represented as hypergraphs. Traditional models of random CRNs often reduce CRNs to bipartite graphs,…

Statistical Mechanics · Physics 2025-07-15 Shesha Gopal Marehalli Srinivas , Massimiliano Esposito , Nahuel Freitas

Hypergraphs play a pivotal role in the modelling of data featuring higher-order relations involving more than two entities. Hypergraph neural networks emerge as a powerful tool for processing hypergraph-structured data, delivering…

Machine Learning · Computer Science 2024-06-04 Zexi Liu , Bohan Tang , Ziyuan Ye , Xiaowen Dong , Siheng Chen , Yanfeng Wang

We extend previous work of max-linear models on finite directed acyclic graphs to infinite graphs as well as random graphs, and investigate their relations to classical percolation theory, more particularly the impact of Bernoulli bond…

Probability · Mathematics 2022-06-27 Claudia Klüppelberg , Ercan Sönmez

In many systems consisting of interacting subsystems, the complex interactions between elements can be represented using multilayer networks. However percolation, key to understanding connectivity and robustness, is not trivially…

Disordered Systems and Neural Networks · Physics 2020-11-04 G. J. Baxter , R. A. da Costa , S. N. Dorogovtsev , J. F. F. Mendes

Most previous heterogeneous graph embedding models represent elements in a heterogeneous graph as vector representations in a low-dimensional Euclidean space. However, because heterogeneous graphs inherently possess complex structures, such…

Machine Learning · Computer Science 2024-04-16 Jongmin Park , Seunghoon Han , Soohwan Jeong , Sungsu Lim

Understanding the resilience of infrastructures such as transportation network has significant importance for our daily life. Recently, a homogeneous spatial network model was developed for studying spatial embedded networks with…

Physics and Society · Physics 2020-06-24 Bnaya Gross , Dana Vaknin , Sergey V. Buldyrev , Shlomo Havlin

Most statistical models for networks focus on pairwise interactions between nodes. However, many real-world networks involve higher-order interactions among multiple nodes, such as co-authors collaborating on a paper. Hypergraphs provide a…

Methodology · Statistics 2025-09-16 Yichao Chen , Jingfei Zhang , Ji Zhu

From social interactions to the human brain, higher-order networks are key to describe the underlying network geometry and topology of many complex systems. While it is well known that network structure strongly affects its function, the…

Statistical Mechanics · Physics 2022-01-11 Ana P Millán , Reza Ghorbanchian , Nicolò Defenu , Federico Battiston , Ginestra Bianconi

How the giant component of a network disappears under attacking nodes or links addresses a key aspect of network robustness, which can be framed into percolation problems. Various strategies to select the node to be deactivated have been…

Physics and Society · Physics 2020-07-22 Jung-Ho Kim , Soo-Jeong Kim , K. -I. Goh

Higher-order networks have emerged as a powerful framework to model complex systems and their collective behavior. Going beyond pairwise interactions, they encode structured relations among arbitrary numbers of units through representations…

Adaptation and Self-Organizing Systems · Physics 2023-03-24 Yuanzhao Zhang , Maxime Lucas , Federico Battiston

We study the effects of nonreciprocity and network structure on percolation. To this end, we investigate nonreciprocal random networks - directed networks for which the probability of a link occurring from node i to node j differs from the…

Statistical Mechanics · Physics 2025-10-07 Chanania Steinbock

In heterogeneous graphs, we can observe complex structures such as tree-like or hierarchical structures. Recently, the hyperbolic space has been widely adopted in many studies to effectively learn these complex structures. Although these…

Machine Learning · Computer Science 2026-01-14 Jongmin Park , Seunghoon Han , Hyewon Lee , Won-Yong Shin , Sungsu Lim

Many biological tissues feature a heterogeneous network of fibers whose tensile and bending rigidity contribute substantially to these tissues' elastic properties. Rigidity percolation has emerged as a important paradigm for relating these…

Background: Representing biological networks as graphs is a powerful approach to reveal underlying patterns, signatures, and critical components from high-throughput biomolecular data. However, graphs do not natively capture the multi-way…