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A myriad of approaches have been proposed to characterise the mesoscale structure of networks - most often as a partition based on patterns variously called communities, blocks, or clusters. Clearly, distinct methods designed to detect…

Social and Information Networks · Computer Science 2023-10-06 Lena Mangold , Camille Roth

A principled approach to characterize the hidden structure of networks is to formulate generative models, and then infer their parameters from data. When the desired structure is composed of modules or "communities", a suitable choice for…

Data Analysis, Statistics and Probability · Physics 2018-08-23 Tiago P. Peixoto

The stochastic blockmodel (SBM) models the connectivity within and between disjoint subsets of nodes in networks. Prior work demonstrated that the rows of an SBM's adjacency spectral embedding (ASE) and Laplacian spectral embedding (LSE)…

Methodology · Statistics 2022-05-04 Zachary M. Pisano , Joshua S. Agterberg , Carey E. Priebe , Daniel Q. Naiman

Clustering of single-cell RNA sequencing (scRNA-seq) datasets can give key insights into the biological functions of cells. Therefore, it is not surprising that network-based community detection methods (one of the better clustering…

Methodology · Statistics 2026-02-17 Chetkar Jha , Mingyao Li , Ian Barnett

In this article we focus on dynamic network data which describe interactions among a fixed population through time. We model this data using the latent space framework, in which the probability of a connection forming is expressed as a…

Methodology · Statistics 2021-12-21 Kathryn Turnbull , Christopher Nemeth , Matthew Nunes , Tyler McCormick

In order to numerically solve high-dimensional nonlinear PDEs and alleviate the curse of dimensionality, a stochastic particle method (SPM) has been proposed to capture the relevant feature of the solution through the adaptive evolution of…

Numerical Analysis · Mathematics 2026-03-16 Jingyang Huang , Zhengyang Lei , Sihong Shao

Clustering is a fundamental collective phenomenon in agent-based models (ABMs) of opinion dynamics. To study clustering in systems with co-evolving social and opinion variables, we derive stochastic partial differential equation (SPDE)…

Physics and Society · Physics 2026-05-01 Sebastian Zimper , Nataša Djurdjevac Conrad , Federico Cornalba , Ana Djurdjevac

Communities are a common and widely studied structure in networks, typically under the assumption that the network is fully and correctly observed. In practice, network data are often collected by querying nodes about their connections. In…

Methodology · Statistics 2021-03-22 Tianxi Li , Elizaveta Levina , Ji Zhu

Clustering algorithms fundamentally group data points by characteristics to identify patterns. Over the past two decades, researchers have extended these methods to analyze trajectories of humans, animals, and vehicles, studying their…

Machine Learning · Computer Science 2025-12-17 Atieh Rahmani , Mansoor Davoodi , Justin M. Calabrese

Roughly speaking, clustering evolving networks aims at detecting structurally dense subgroups in networks that evolve over time. This implies that the subgroups we seek for also evolve, which results in many additional tasks compared to…

Social and Information Networks · Computer Science 2014-01-16 Tanja Hartmann , Andrea Kappes , Dorothea Wagner

Multiplex networks have become increasingly more prevalent in many fields, and have emerged as a powerful tool for modeling the complexity of real networks. There is a critical need for developing inference models for multiplex networks…

Social and Information Networks · Computer Science 2023-02-14 Arash A. Amini , Marina S. Paez , Lizhen Lin

Bayesian networks (BNs) are graphical models that are useful for representing high-dimensional probability distributions. There has been a great deal of interest in recent years in the NP-hard problem of learning the structure of a BN from…

Machine Learning · Statistics 2016-10-04 D. Jennings , J. N. Corcoran

Stochastic models that incorporate birth, death and immigration (also called birth-death and innovation models) are ubiquitous and applicable to many research topics such as quantifying species sizes in ecological populations, describing…

Populations and Evolution · Quantitative Biology 2026-05-12 Renaud Dessalles , Maria D'Orsogna , Tom Chou

The Degree Corrected Stochastic Block Model (DCSBM) was introduced by \cite{karrer2011stochastic} as a generalization of the stochastic block model in which vertices of the same community are allowed to have distinct degree distributions.…

Statistics Theory · Mathematics 2024-06-27 Andressa Cerqueira , Sandro Gallo , Florencia Leonardi , Cristel Vera

Neighbor Embedding (NE) aims to preserve pairwise similarities between data items and has been shown to yield an effective principle for data visualization. However, even the best existing NE methods such as Stochastic Neighbor Embedding…

Machine Learning · Computer Science 2021-09-15 Zhirong Yang , Yuwei Chen , Denis Sedov , Samuel Kaski , Jukka Corander

Massive volumes of high-dimensional data that evolves over time is continuously collected by contemporary information processing systems, which brings up the problem of organizing this data into clusters, i.e. achieve the purpose of…

Machine Learning · Computer Science 2019-10-22 Di Xu , Tianhang Long , Junbin Gao

Clustering and community detection with multiple graphs have typically focused on aligned graphs, where there is a mapping between nodes across the graphs (e.g., multi-view, multi-layer, temporal graphs). However, there are numerous…

Social and Information Networks · Computer Science 2019-04-11 Guilherme Gomes , Vinayak Rao , Jennifer Neville

Community structure is pervasive in various real-world networks, portraying the strong local clustering of nodes. Unveiling the community structure of a network is deemed to a crucial step towards understanding the dynamics on the network.…

Physics and Society · Physics 2024-10-30 Weihua Zhan , Lei Deng , Jihong Guan , Jun Niu

This work proposes stochastic partial differential equations (SPDEs) as a practical tool to replicate clustering effects of more detailed particle-based dynamics. Inspired by membrane-mediated receptor dynamics on cell surfaces, we…

Quantitative Methods · Quantitative Biology 2025-01-22 Nathalie Wehlitz , Mohsen Sadeghi , Alberto Montefusco , Christof Schütte , Grigorios A. Pavliotis , Stefanie Winkelmann

Stochastic Block Models (SBMs) are a fundamental tool for community detection in network analysis. But little theoretical work exists on the statistical performance of Bayesian SBMs, especially when the community count is unknown. This…

Statistics Theory · Mathematics 2021-01-19 Sheng Jiang , Surya Tokdar