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Motivation: The ability to perform operations on encrypted data has a growing number of applications in bioinformatics, with implications for data privacy in health care and biosecurity. The SEAL library is a popular implementation of fully…

Quantitative Methods · Quantitative Biology 2018-03-07 Alexander J. Titus , Shashwat Kishore , Todd Stavish , Stephanie M. Rogers , Karl Ni

Python has become the de-facto language for training deep neural networks, coupling a large suite of scientific computing libraries with efficient libraries for tensor computation such as PyTorch or TensorFlow. However, when models are used…

Machine Learning · Computer Science 2021-04-02 Zachary DeVito , Jason Ansel , Will Constable , Michael Suo , Ailing Zhang , Kim Hazelwood

We introduce PrivPy, a practical privacy-preserving collaborative computation framework, especially optimized for machine learning tasks. PrivPy provides an easy-to-use and highly compatible Python programming front-end which supports…

Cryptography and Security · Computer Science 2020-04-22 Yi Li , Yitao Duan , Yu Yu , Shuoyao Zhao , Wei Xu

Open science is a fundamental pillar to promote scientific progress and collaboration, based on the principles of open data, open source and open access. However, the requirements for publishing and sharing open data are in many cases…

Cryptography and Security · Computer Science 2024-08-21 Judith Sáinz-Pardo Díaz , Álvaro López García

Recently proposed modifications of the standard particle-in-cell (PIC) method resolve long-standing limitations such as exact preservation of physically conserved quantities and unbiased ensemble down-sampling. Such advances pave the way…

Plasma Physics · Physics 2026-03-13 Frida Brogren , Christoffer Olofsson , Joel Magnusson , Arkady Gonoskov

Recent compilers allow a general-purpose program (written in a conventional programming language) that handles private data to be translated into secure distributed implementation of the corresponding functionality. The resulting program is…

Cryptography and Security · Computer Science 2017-07-04 Yihua Zhang , Marina Blanton , Ghada Almashaqbeh

In this paper, we present pomdp_py, a general purpose Partially Observable Markov Decision Process (POMDP) library written in Python and Cython. Existing POMDP libraries often hinder accessibility and efficient prototyping due to the…

Artificial Intelligence · Computer Science 2020-04-22 Kaiyu Zheng , Stefanie Tellex

Since its conception in 2006, differential privacy has emerged as the de-facto standard in data privacy, owing to its robust mathematical guarantees, generalised applicability and rich body of literature. Over the years, researchers have…

Cryptography and Security · Computer Science 2019-07-05 Naoise Holohan , Stefano Braghin , Pól Mac Aonghusa , Killian Levacher

Users can divulge sensitive information to proprietary LLM providers, raising significant privacy concerns. While open-source models, hosted locally on the user's machine, alleviate some concerns, models that users can host locally are…

Cryptography and Security · Computer Science 2025-03-27 Li Siyan , Vethavikashini Chithrra Raghuram , Omar Khattab , Julia Hirschberg , Zhou Yu

PyMilo is an open-source Python package that addresses the limitations of existing Machine Learning (ML) model storage formats by providing a transparent, reliable, and safe method for exporting and deploying trained models. Current…

Machine Learning · Computer Science 2025-01-03 AmirHosein Rostami , Sepand Haghighi , Sadra Sabouri , Alireza Zolanvari

Most separation logics hide container-internal pointers for modularity. This makes it difficult to specify container APIs that temporarily expose those pointers to the outside, and to verify programs that use these APIs. We present logical…

Programming Languages · Computer Science 2025-12-08 Yawen Guan , Clément Pit-Claudel

While recent advancements in Neural Ranking Models have resulted in significant improvements over traditional statistical retrieval models, it is generally acknowledged that the use of large neural architectures and the application of…

Information Retrieval · Computer Science 2025-05-13 Sourav Saha , Harsh Agarwal , V Venktesh , Avishek Anand , Swastik Mohanty , Debapriyo Majumdar , Mandar Mitra

In object systems, classes take the role of modules, and interfaces consist of methods. Because methods are encapsulated in objects, interfaces in object systems do not allow abstracting over \emph{where} methods are implemented. This…

Programming Languages · Computer Science 2011-10-18 David Lievens , Bill Harrison

Demand for data-intensive workloads and confidential computing are the prominent research directions shaping the future of cloud computing. Computer architectures are evolving to accommodate the computing of large data better. Protecting…

Cryptography and Security · Computer Science 2023-04-11 Kha Dinh Duy , Hojoon Lee

This work describes the TrueLearn Python library, which contains a family of online learning Bayesian models for building educational (or more generally, informational) recommendation systems. This family of models was designed following…

Information Retrieval · Computer Science 2023-09-22 Yuxiang Qiu , Karim Djemili , Denis Elezi , Aaneel Shalman , María Pérez-Ortiz , Sahan Bulathwela

Despite being the most popular programming language, Python has not yet received enough attention from the community. To the best of our knowledge, there is no general static analysis framework proposed to facilitate the implementation of…

Software Engineering · Computer Science 2022-02-25 Li Li , Jiawei Wang , Haowei Quan

We introduce Opacus, a free, open-source PyTorch library for training deep learning models with differential privacy (hosted at opacus.ai). Opacus is designed for simplicity, flexibility, and speed. It provides a simple and user-friendly…

We offer an embedding of CPython that runs entirely in memory without "touching" the disk. This in-memory embedding can load Python scripts directly from memory instead these scripts having to be loaded from files on disk. Malware that…

Cryptography and Security · Computer Science 2021-05-06 Ateeq Sharfuddin , Brian Chapman , Chris Balles

Differential privacy is the standard method for privacy-preserving data analysis. The importance of having strong guarantees on the reliability of implementations of differentially private algorithms is widely recognized and has sparked…

Allowing organizations to share their data for training of machine learning (ML) models without unintended information leakage is an open problem in practice. A promising technique for this still-open problem is to train models on the…

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