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The edit distance between two rooted ordered trees with $n$ nodes labeled from an alphabet~$\Sigma$ is the minimum cost of transforming one tree into the other by a sequence of elementary operations consisting of deleting and relabeling…

Data Structures and Algorithms · Computer Science 2017-03-28 Karl Bringmann , Paweł Gawrychowski , Shay Mozes , Oren Weimann

Digital contents in large scale distributed storage systems may have different reliability and access delay requirements, and for this reason, erasure codes with different strengths need to be utilized to achieve the best storage…

Information Theory · Computer Science 2016-04-29 Chao Tian , Tie Liu

String similarity, longest common subsequence and shortest edit scripts are the triplets of problem that related to each other. There are different algorithms exist to generate edit script by solving longest common subsequence problem. This…

Data Structures and Algorithms · Computer Science 2022-08-19 P. Prakash Maria Liju

The Binary Jumbled String Matching problem is defined as: Given a string $s$ over $\{a,b\}$ of length $n$ and a query $(x,y)$, with $x,y$ non-negative integers, decide whether $s$ has a substring $t$ with exactly $x$ $a$'s and $y$ $b$'s.…

Data Structures and Algorithms · Computer Science 2013-06-03 Golnaz Badkobeh , Gabriele Fici , Steve Kroon , Zsuzsanna Lipták

In this paper, two moment balancing schemes, namely a variable index scheme and a fixed index scheme, for either single insertion/deletion error correction or multiple substitution error correction are introduced for coded sequences…

Information Theory · Computer Science 2019-01-24 Ling Cheng , Hendrik C. Ferreira

Recently Liu, Long, Tong and Li [Phys. Rev. A 65, 022304 (2002)] have proposed a scheme for superdense coding between multiparties. This scheme seems to be highly asymmetric in the sense that only one sender effectively exploits…

Quantum Physics · Physics 2009-11-07 Andrzej Grudka , Antoni Wojcik

Let $X_1, X_2, ..., X_s$ and $Y_1, Y_2, ..., Y_t$ be strings over an alphabet $\Sigma$, where $s$ and $t$ are positive integers. The longest common subsequence and substring problem for multiple strings $X_1, X_2, ..., X_s$ and $Y_1, Y_2,…

Data Structures and Algorithms · Computer Science 2024-11-26 Rao Li

This paper proposes an erasure correcting code and its systematic form for the distributed storage system. The proposed codes are encoded by exclusive OR and bit-level shift operation. By the shift operation, the encoded packets are…

Information Theory · Computer Science 2020-01-08 Yuta Hanaki , Takayuki Nozaki

We give cell-probe bounds for the computation of edit distance, Hamming distance, convolution and longest common subsequence in a stream. In this model, a fixed string of $n$ symbols is given and one $\delta$-bit symbol arrives at a time in…

Data Structures and Algorithms · Computer Science 2014-07-25 Raphael Clifford , Markus Jalsenius , Benjamin Sach

The problem of data exchange between multiple nodes with storage and communication capabilities models several current multi-user communication problems like Coded Caching, Data Shuffling, Coded Computing, etc. The goal in such problems is…

Information Theory · Computer Science 2021-08-11 Prasad Krishnan , Lakshmi Natarajan , V. Lalitha

This paper presents an efficient fair document exchange protocol. The exchange of the documents will be between two parties. The protocol is based on the verifiable and recoverable encryption of a document's key. This verifiable and…

Cryptography and Security · Computer Science 2012-04-10 Abdullah M. Alaraj

There are efficient dynamic programming solutions to the computation of the Edit Distance from $S\in[1..\sigma]^n$ to $T\in[1..\sigma]^m$, for many natural subsets of edit operations, typically in time within $O(nm)$ in the worst-case over…

Information Retrieval · Computer Science 2018-06-13 Jérémy Barbay , Andrés Olivares

The maximum common subtree isomorphism problem asks for the largest possible isomorphism between subtrees of two given input trees. This problem is a natural restriction of the maximum common subgraph problem, which is ${\sf NP}$-hard in…

Data Structures and Algorithms · Computer Science 2016-08-23 Andre Droschinsky , Nils M. Kriege , Petra Mutzel

Permutation codes in the Ulam metric, which can correct multiple deletions, have been investigated extensively recently. In this work, we are interested in the maximum size of permutation codes in the Ulam metric and aim to design…

Information Theory · Computer Science 2024-12-11 Shuche Wang , The Nguyen , Yeow Meng Chee , Van Khu Vu

Auctions are widely used in exchanges to match buy and sell requests. Once the buyers and sellers place their requests, the exchange determines how these requests are to be matched. The two most popular objectives used while determining the…

Data Structures and Algorithms · Computer Science 2024-03-06 Mohit Garg , Suneel Sarswat

In multilingual colloquial settings, it is a habitual occurrence to compose expressions of text or speech containing tokens or phrases of different languages, a phenomenon popularly known as code-switching or code-mixing (CMX). We present…

Computation and Language · Computer Science 2022-11-01 Lekan Raheem , Maab Elrashid

This paper investigates the (quasi-)periodicity of a string when the string is edited. A string $C$ is called a cover (as known as a quasi-period) of a string $T$ if each character of $T$ lies within some occurrence of $C$. By definition, a…

Data Structures and Algorithms · Computer Science 2024-04-29 Kazuki Mitani , Takuya Mieno , Kazuhisa Seto , Takashi Horiyama

The problem called "String reconstruction from substrings" is a mathematical model of sequencing by hybridization that plays an important role in DNA sequencing. In this problem, we are given a blackbox oracle holding an unknown string…

Data Structures and Algorithms · Computer Science 2018-08-03 Kazuo Iwama , Junichi Teruyama , Shuntaro Tsuyama

We propose a new coding scheme, called the delayed coding (DC) scheme, for channels with insertion, deletion, and substitution (IDS) errors. The proposed scheme employs delayed encoding and non-iterative detection and decoding strategies to…

Information Theory · Computer Science 2022-05-25 Ryo Shibata , Hiroyuki Yashima

Due to its higher data density, longevity, energy efficiency, and ease of generating copies, DNA is considered a promising storage technology for satisfying future needs. However, a diverse set of errors including deletions, insertions,…

Information Theory · Computer Science 2022-08-05 Yuanyuan Tang , Shuche Wang , Hao Lou , Ryan Gabrys , Farzad Farnoud