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In a research context, image acquisition will often involve a pre-defined static protocol and the data will be of high quality. If we are to build applications that work in hospitals without significant operational changes in care delivery,…

Computer Vision and Pattern Recognition · Computer Science 2018-07-18 Thomas Varsavsky , Zach Eaton-Rosen , Carole H. Sudre , Parashkev Nachev , M. Jorge Cardoso

We characterize structures such as monotonicity, convexity, and modality in smooth regression curves using persistent homology. Persistent homology is a key tool in topological data analysis that detects higher-dimensional topological…

Algebraic Topology · Mathematics 2025-10-28 Satish Kumar , Subhra Sankar Dhar

Medical imaging is essential in healthcare to provide key insights into patient anatomy and pathology, aiding in diagnosis and treatment. Non-invasive techniques such as X-ray, Magnetic Resonance Imaging (MRI), Computed Tomography (CT), and…

Image and Video Processing · Electrical Eng. & Systems 2024-12-04 Fnu Neha , Deepshikha Bhati , Deepak Kumar Shukla , Sonavi Makarand Dalvi , Nikolaos Mantzou , Safa Shubbar

Precise segmentation of medical images is fundamental for extracting critical clinical information, which plays a pivotal role in enhancing the accuracy of diagnoses, formulating effective treatment plans, and improving patient outcomes.…

Image and Video Processing · Electrical Eng. & Systems 2024-06-21 Jintong Hu , Siyan Chen , Zhiyi Pan , Sen Zeng , Wenming Yang

Medical image segmentation plays a crucial role in computer-aided diagnosis. However, existing methods heavily rely on fully supervised training, which requires a large amount of labeled data with time-consuming pixel-wise annotations.…

Computer Vision and Pattern Recognition · Computer Science 2024-09-04 Yunqi Gu , Tao Zhou , Yizhe Zhang , Yi Zhou , Kelei He , Chen Gong , Huazhu Fu

Semantic segmentation is an essential component of medical image analysis research, with recent deep learning algorithms offering out-of-the-box applicability across diverse datasets. Despite these advancements, segmentation failures remain…

Computer Vision and Pattern Recognition · Computer Science 2024-10-23 Maximilian Zenk , David Zimmerer , Fabian Isensee , Jeremias Traub , Tobias Norajitra , Paul F. Jäger , Klaus Maier-Hein

This paper presents a new regularization method to train a fully convolutional network for semantic tissue segmentation in histopathological images. This method relies on the benefit of unsupervised learning, in the form of image…

Computer Vision and Pattern Recognition · Computer Science 2020-11-26 C. T. Sari , C. Sokmensuer , C. Gunduz-Demir

Accurate segmentation of long and thin tubular structures is required in a wide variety of areas such as biology, medicine, and remote sensing. The complex topology and geometry of such structures often pose significant technical…

Image and Video Processing · Electrical Eng. & Systems 2024-07-23 Jiaxing Huang , Yanfeng Zhou , Yaoru Luo , Guole Liu , Heng Guo , Ge Yang

Topological data analysis (TDA) uncovers crucial properties of objects in medical imaging. Methods based on persistent homology have demonstrated their advantages in capturing topological features that traditional deep learning methods…

Computer Vision and Pattern Recognition · Computer Science 2024-08-16 Yanfan Zhu , Yash Singh , Khaled Younis , Shunxing Bao , Yuankai Huo

Convolutional neural networks (CNNs) have achieved state-of-the-art performance for automatic medical image segmentation. However, they have not demonstrated sufficiently accurate and robust results for clinical use. In addition, they are…

Computer Vision and Pattern Recognition · Computer Science 2018-07-23 Guotai Wang , Wenqi Li , Maria A. Zuluaga , Rosalind Pratt , Premal A. Patel , Michael Aertsen , Tom Doel , Anna L. David , Jan Deprest , Sebastien Ourselin , Tom Vercauteren

Persistence diagrams have been widely recognized as a compact descriptor for characterizing multiscale topological features in data. When many datasets are available, statistical features embedded in those persistence diagrams can be…

Algebraic Topology · Mathematics 2017-07-07 Ippei Obayashi , Yasuaki Hiraoka

Although deep learning greatly improves the performance of semantic segmentation, its success mainly lies in object central areas without accurate edges. As superpixels are a popular and effective auxiliary to preserve object edges, in this…

Computer Vision and Pattern Recognition · Computer Science 2020-11-25 Zhiwei Xu , Thalaiyasingam Ajanthan , Richard Hartley

We propose the Topology-Preserving Segmentation Network, a deformation-based model that can extract objects in an image while maintaining their topological properties. This network generates segmentation masks that have the same topology as…

Computer Vision and Pattern Recognition · Computer Science 2024-06-18 Han Zhang , Lok Ming Lui

Medical image segmentation has witnessed significant advancements with the emergence of deep learning. However, the reliance of most neural network models on a substantial amount of annotated data remains a challenge for medical image…

Computer Vision and Pattern Recognition · Computer Science 2024-07-30 Xiaoxiao Wu , Xiaowei Chen , Zhenguo Gao , Shulei Qu , Yuanyuan Qiu

Magnetic resonance imaging (MRI) is a potent diagnostic tool for detecting pathological tissues in various diseases. Different MRI sequences have different contrast mechanisms and sensitivities for different types of lesions, which pose…

Computer Vision and Pattern Recognition · Computer Science 2025-05-13 Lijun Yan , Churan Wang , Fangwei Zhong , Yizhou Wang

Structures matter in single image super resolution (SISR). Recent studies benefiting from generative adversarial network (GAN) have promoted the development of SISR by recovering photo-realistic images. However, there are always undesired…

Image and Video Processing · Electrical Eng. & Systems 2020-03-31 Cheng Ma , Yongming Rao , Yean Cheng , Ce Chen , Jiwen Lu , Jie Zhou

Deep learning methods have achieved impressive performance for multi-class medical image segmentation. However, they are limited in their ability to encode topological interactions among different classes (e.g., containment and exclusion).…

Super-resolution plays an essential role in medical imaging because it provides an alternative way to achieve high spatial resolutions and image quality with no extra acquisition costs. In the past few decades, the rapid development of deep…

Image and Video Processing · Electrical Eng. & Systems 2023-03-06 Jin Zhu , Guang Yang , Pietro Lio

Recent advances have been made in applying convolutional neural networks to achieve more precise prediction results for medical image segmentation problems. However, the success of existing methods has highly relied on huge computational…

Image and Video Processing · Electrical Eng. & Systems 2021-08-24 Dian Qin , Jiajun Bu , Zhe Liu , Xin Shen , Sheng Zhou , Jingjun Gu , Zhijua Wang , Lei Wu , Huifen Dai