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One-counter nets (OCN) are Petri nets with exactly one unbounded place. They are equivalent to a subclass of one-counter automata with only a weak test for zero. We show that weak simulation preorder is decidable for OCN and that weak…

Formal Languages and Automata Theory · Computer Science 2014-06-17 Piotr Hofman , Richard Mayr , Patrick Totzke

In this paper, we propose a compositional approach to constructing correct formal models of information systems from correct models of interacting components. Component behavior is represented using workflow nets - a class of Petri nets.…

Logic in Computer Science · Computer Science 2022-08-03 Luca Bernardinello , Irina Lomazova , Roman Nesterov , Lucia Pomello

In Petri net synthesis we ask whether a given transition system $A$ can be implemented by a Petri net $N$. Depending on the level of accuracy, there are three ways how $N$ can implement $A$: an embedding, the least accurate implementation,…

Formal Languages and Automata Theory · Computer Science 2023-06-22 Raymond Devillers , Ronny Tredup

Persistence modules are a central algebraic object arising in topological data analysis. The notion of interleaving provides a natural way to measure distances between persistence modules. We consider various classes of persistence modules,…

Algebraic Topology · Mathematics 2019-12-12 Peter Bubenik , Tane Vergili

Critical observability is a property of cyber-physical systems to detect whether the current state belongs to a set of critical states. In safety-critical applications, critical states model operations that may be unsafe or of a particular…

Systems and Control · Computer Science 2019-04-18 Tomáš Masopust

One of the well-known results in concurrency theory concerns the relationship between event structures and occurrence nets: an occurrence net can be associated with a prime event structure, and vice versa. More generally, the relationships…

Logic in Computer Science · Computer Science 2019-10-25 Hernán Melgratti , Claudio Antares Mezzina , Iain Phillips , G. Michele Pinna , Irek Ulidowski

Turing's theory of pattern formation is a universal model for self-organization, applicable to many systems in physics, chemistry and biology. Essential properties of a Turing system, such as the conditions for the existence of patterns and…

Adaptation and Self-Organizing Systems · Physics 2018-08-02 Xavier Diego , Luciano Marcon , Patrick Müller , James Sharpe

We present a unified framework for Petri nets and various variants, such as pre-nets and Kock's whole-grain Petri nets. Our framework is based on a less well-studied notion that we call $\Sigma$-nets, which allow finer control over whether…

Category Theory · Mathematics 2021-04-28 John C. Baez , Fabrizio Genovese , Jade Master , Michael Shulman

Self-similarity is the property of a system being similar to a part of itself. We posit that a special class of behaviourally self-similar systems exhibits a degree of resilience to adversarial behaviour. We formalise the notions of system,…

Programming Languages · Computer Science 2016-08-11 Sanjiva Prasad , Lenore D. Zuck

Why are large, complex ecosystems stable? Both theory and simulations of current models predict the onset of instability with growing size and complexity, so for decades it has been conjectured that ecosystems must have some unidentified…

Populations and Evolution · Quantitative Biology 2016-08-11 Samuel Johnson , Virginia Domínguez-García , Luca Donetti , Miguel A. Muñoz

We study trace theoretic concurrent systems. This setting encompasses safe (1-bounded) Petri nets. We introduce a notion of irreducible concurrent system and we prove the equivalence between irreducibility and a "spectral property". The…

Combinatorics · Mathematics 2021-05-12 Samy Abbes , Jean Mairesse , Yi-Ting Chen

We consider biochemical systems associated with a generalised class of Petri nets with possibly negative token numbers. We show that the existence of a structural polyhedral Lyapunov function for the biochemical system is equivalent to the…

Systems and Control · Electrical Eng. & Systems 2021-09-07 Franco Blanchini , Carlos Andrés Devia , Giulia Giordano

There is a deep connection between permutations and trees. Certain sub-structures of permutations, called sub-permutations, bijectively map to sub-trees of binary increasing trees. This opens a powerful tool set to study enumerative and…

Combinatorics · Mathematics 2014-07-02 Filippo Disanto , Thomas Wiehe

We show that subsets of interacting oscillators may synchronize in different ways within a single network. This diversity of synchronization patterns is promoted by increasing the heterogeneous distribution of coupling weights and/or…

Pattern Formation and Solitons · Physics 2017-04-05 Daniel Malagarriga , Alessandro E. P. Villa , Jordi García-Ojalvo , Antonio J. Pons

This article deals with the consensus problem involving agents with time-varying singularities in the dynamics or communication in undirected graph networks. Existing results provide control laws which guarantee asymptotic consensus. These…

Systems and Control · Computer Science 2014-04-07 Nilanjan Roy Chowdhury , Srikant Sukumar

A principled approach to understand network structures is to formulate generative models. Given a collection of models, however, an outstanding key task is to determine which one provides a more accurate description of the network at hand,…

Machine Learning · Statistics 2018-06-29 Toni Vallès-Català , Tiago P. Peixoto , Roger Guimerà , Marta Sales-Pardo

Let $n \ge 3$ be an integer. Let $P_n = \{1, 2, 3, ..., n-1, n \}$ and let $S_n$ be the symmetric group of permutations on $P_n$. Motivated by the theory of discrete dynamical systems on the interval, we associate each permutation $\si_n$…

Rings and Algebras · Mathematics 2009-09-30 Bau-Sen Du

We study the notion of uniform measure on the space of infinite executions of a 1-safe Petri net. Here, executions of 1-safe Petri nets are understood up to commutation of concurrent transitions, which introduces a challenge compared to…

Formal Languages and Automata Theory · Computer Science 2017-06-20 Samy Abbes

The concept of nestedness, in particular for ecological and economical networks, has been introduced as a structural characteristic of real interacting systems. We suggest that the nestedness is in fact another way to express a mesoscale…

Physics and Society · Physics 2016-02-22 Sang Hoon Lee

To better understand the temporal characteristics and the lifetime of fluctuations in stochastic processes in networks, we investigated diffusive persistence in various graphs. Global diffusive persistence is defined as the fraction of…

Statistical Mechanics · Physics 2024-06-04 Omar Malik , Melinda Varga , Alaa Moussawi , David Hunt , Boleslaw Szymanski , Zoltan Toroczkai , Gyorgy Korniss