Related papers: Dynamic Pattern Matching with Wildcards
The edit distance is a way of quantifying how similar two strings are to one another by counting the minimum number of character insertions, deletions, and substitutions required to transform one string into the other. A simple dynamic…
We present an improved algorithm for solving symmetrically diagonally dominant linear systems. On input of an $n\times n$ symmetric diagonally dominant matrix $A$ with $m$ non-zero entries and a vector $b$ such that $A\bar{x} = b$ for some…
In this paper we study the fundamental problem of maintaining a dynamic collection of strings under the following operations: concat - concatenates two strings, split - splits a string into two at a given position, compare - finds the…
We present a new deterministic algorithm for the sparse Fourier transform problem, in which we seek to identify k << N significant Fourier coefficients from a signal of bandwidth N. Previous deterministic algorithms exhibit quadratic…
We give a stochastic optimization algorithm that solves a dense $n\times n$ real-valued linear system $Ax=b$, returning $\tilde x$ such that $\|A\tilde x-b\|\leq \epsilon\|b\|$ in time: $$\tilde O((n^2+nk^{\omega-1})\log1/\epsilon),$$ where…
In this paper, we consider tree decompositions, branch decompositions, and clique decompositions. We improve the running time of dynamic programming algorithms on these graph decompositions for a large number of problems as a function of…
Arising from structural graph theory, treewidth has become a focus of study in fixed-parameter tractable algorithms in various communities including combinatorics, integer-linear programming, and numerical analysis. Many NP-hard problems…
In the area of parameterized complexity, to cope with NP-Hard problems, we introduce a parameter k besides the input size n, and we aim to design algorithms (called FPT algorithms) that run in O(f(k)n^d) time for some function f(k) and…
We give an algorithm that given a graph $G$ with $n$ vertices and $m$ edges and an integer $k$, in time $O_k(n^{1+o(1)}) + O(m)$ either outputs a rank decomposition of $G$ of width at most $k$ or determines that the rankwidth of $G$ is…
We give a new general approach for designing exact exponential-time algorithms for subset problems. In a subset problem the input implicitly describes a family of sets over a universe of size n and the task is to determine whether the…
Finding a maximum-cardinality or maximum-weight matching in (edge-weighted) undirected graphs is among the most prominent problems of algorithmic graph theory. For $n$-vertex and $m$-edge graphs, the best known algorithms run in…
We study a class of finite state machines, called \defi{$w$-matching machines}, which yield to simulate the behavior of pattern matching algorithms while searching for a pattern $w$. They can be used to compute the asymptotic speed, i.e.…
In this paper, we extend the notion of gapped strings to elastic-degenerate strings. An elastic-degenerate string can been seen as an ordered collection of k > 1 seeds (substrings/subpatterns) interleaved by elastic-degenerate symbols such…
The paper proposes dynamic parallel algorithms for connectivity and bipartiteness of undirected graphs that require constant time and $O(n^{1/2+\epsilon})$ work on the CRCW PRAM model. The work of these algorithms almost matches the work of…
We provide new high-accuracy randomized algorithms for solving linear systems and regression problems that are well-conditioned except for $k$ large singular values. For solving such $d \times d$ positive definite system our algorithms…
In the fully dynamic edge connectivity problem, the input is a simple graph $G$ undergoing edge insertions and deletions, and the goal is to maintain its edge connectivity, denoted $\lambda_G$. We present two simple randomized algorithms…
We give new upper and lower bounds for the {\em dynamic} set cover problem. First, we give a $(1+\epsilon) f$-approximation for fully dynamic set cover in $O(f^2\log n /\epsilon^5)$ (amortized) update time, for any $\epsilon > 0$, where $f$…
We consider the streaming complexity of a fundamental task in approximate pattern matching: the $k$-mismatch problem. It asks to compute Hamming distances between a pattern of length $n$ and all length-$n$ substrings of a text for which the…
The dictionary matching problem preprocesses a set of patterns and finds all occurrences of each of the patterns in a text when it is provided. We focus on the dynamic setting, in which patterns can be inserted to and removed from the…
Finding a list of k teams of experts, referred to as top-k team formation, with the required skills and high collaboration compatibility has been extensively studied. However, existing methods have not considered the specific collaboration…