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Accurate diagnostic coding of medical notes is crucial for enhancing patient care, medical research, and error-free billing in healthcare organizations. Manual coding is a time-consuming task for providers, and diagnostic codes often…

Machine Learning · Computer Science 2024-12-17 Prajwal Kailas , Max Homilius , Rahul C. Deo , Calum A. MacRae

The exponential growth of online textual content across diverse domains has necessitated advanced methods for automated text classification. Large Language Models (LLMs) based on transformer architectures have shown significant success in…

Computation and Language · Computer Science 2025-09-09 Zhyar Rzgar K Rostam , Gábor Kertész

Large language models (LLMs), including zero-shot and few-shot paradigms, have shown promising capabilities in clinical text generation. However, real-world applications face two key challenges: (1) patient data is highly unstructured,…

Computation and Language · Computer Science 2025-07-10 Garapati Keerthana , Manik Gupta

Unlocking the potential of Large Language Models (LLMs) in data classification represents a promising frontier in natural language processing. In this work, we evaluate the performance of different LLMs in comparison with state-of-the-art…

Computation and Language · Computer Science 2025-01-16 Arina Kostina , Marios D. Dikaiakos , Dimosthenis Stefanidis , George Pallis

Rigorous and interactive class discussions that support students to engage in high-level thinking and reasoning are essential to learning and are a central component of most teaching interventions. However, formally assessing discussion…

Computation and Language · Computer Science 2023-06-28 Nhat Tran , Benjamin Pierce , Diane Litman , Richard Correnti , Lindsay Clare Matsumura

Despite being a unique source of information on patients' status and disease progression, clinical notes are characterized by high levels of duplication and information redundancy. In general domain text, it has been shown that…

Computation and Language · Computer Science 2023-12-18 Isotta Landi , Eugenia Alleva , Alissa A. Valentine , Lauren A. Lepow , Alexander W. Charney

Word embedding parameters often dominate overall model sizes in neural methods for natural language processing. We reduce deployed model sizes of text classifiers by learning a hard word clustering in an end-to-end manner. We use the…

Computation and Language · Computer Science 2019-06-25 Mingda Chen , Kevin Gimpel

Large language models (LLMs) have shown impressive performance on downstream tasks by in-context learning (ICL), which heavily relies on the quality of demonstrations selected from a large set of annotated examples. Recent works claim that…

Computation and Language · Computer Science 2024-10-25 Hongfu Gao , Feipeng Zhang , Wenyu Jiang , Jun Shu , Feng Zheng , Hongxin Wei

Automated document classification is a trending topic in Natural Language Processing (NLP) due to the extensive growth in digital databases. However, a model that fits well for a specific classification task might perform weakly for another…

Machine Learning · Computer Science 2025-10-03 Uvini Ranaweera , Bawun Mawitagama , Sanduni Liyanage , Sandupa Keshan , Tiloka de Silva , Supun Hewawalpita

The use of Convolutional Neural Networks (CNN) in natural image classification systems has produced very impressive results. Combined with the inherent nature of medical images that make them ideal for deep-learning, further application of…

Machine Learning · Computer Science 2016-01-11 Junghwan Cho , Kyewook Lee , Ellie Shin , Garry Choy , Synho Do

Large language models (LLMs) such as GPT-4o and Claude Sonnet 4.5 have demonstrated strong capabilities in open-ended reasoning and generative language tasks, leading to their widespread adoption across a broad range of NLP applications.…

Computation and Language · Computer Science 2026-02-09 Alberto Andres Valdes Gonzalez

Since the inception of Large Language Models (LLMs), the quest to efficiently train them for superior reasoning capabilities has been a pivotal challenge. The dominant training paradigm for LLMs is based on next token prediction (NTP).…

Computation and Language · Computer Science 2025-02-21 Pengxiao Lin , Zhongwang Zhang , Zhi-Qin John Xu

Several biomedical language models have already been developed for clinical language inference. However, these models typically utilize general vocabularies and are trained on relatively small clinical corpora. We sought to evaluate the…

Computation and Language · Computer Science 2022-10-14 Madhumita Sushil , Dana Ludwig , Atul J. Butte , Vivek A. Rudrapatna

This paper achieves state of the art results for the ICD code prediction task using the MIMIC-III dataset. This was achieved through the use of Clinical BERT (Alsentzer et al., 2019). embeddings and text augmentation and label balancing to…

Computation and Language · Computer Science 2020-08-25 Brent Biseda , Gaurav Desai , Haifeng Lin , Anish Philip

Over recent years, an increasing amount of compute and data has been poured into training large language models (LLMs), usually by doing one-pass learning on as many tokens as possible randomly selected from large-scale web corpora. While…

Computation and Language · Computer Science 2023-08-24 Kushal Tirumala , Daniel Simig , Armen Aghajanyan , Ari S. Morcos

In clinical research and clinical decision-making, it is important to know if a study changes or only supports the current standards of care for specific disease management. We define such a change as transformative and a support as…

Computation and Language · Computer Science 2021-12-28 Xuanyu Shi , Jian Du

How can we interpret and retrieve medical evidence to support clinical decisions? Clinical trial reports (CTR) amassed over the years contain indispensable information for the development of personalized medicine. However, it is practically…

Computation and Language · Computer Science 2023-10-31 Maël Jullien , Marco Valentino , Hannah Frost , Paul O'Regan , Donal Landers , André Freitas

Natural language processing (NLP) of clinical trial documents can be useful in new trial design. Here we identify entity types relevant to clinical trial design and propose a framework called CT-BERT for information extraction from clinical…

Quantitative Methods · Quantitative Biology 2021-10-20 Xiong Liu , Greg L. Hersch , Iya Khalil , Murthy Devarakonda

Large Language Models (LLMs), particularly those similar to ChatGPT, have significantly influenced the field of Natural Language Processing (NLP). While these models excel in general language tasks, their performance in domain-specific…

Computation and Language · Computer Science 2024-01-02 Omid Rohanian , Mohammadmahdi Nouriborji , David A. Clifton

Artificial Intelligence (AI) systems are attracting increasing interest in the medical domain due to their ability to learn complicated tasks that require human intelligence and expert knowledge. AI systems that utilize high-performance…

Computation and Language · Computer Science 2021-08-30 Milad Moradi , Kathrin Blagec , Matthias Samwald