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Bifiltered graphs are a versatile tool for modelling relations between data points across multiple grades of a two-dimensional scale. They are especially popular in topological data analysis, where the homological properties of the induced…

Computational Geometry · Computer Science 2023-03-13 Ángel Javier Alonso , Michael Kerber , Siddharth Pritam

Clique and near-clique counts are important graph properties with applications in graph generation, graph modeling, graph analytics, community detection among others. They are the archetypal examples of dense subgraphs. While there are…

Social and Information Networks · Computer Science 2020-06-25 Shweta Jain , C. Seshadhri

Markov Networks are widely used through out computer vision and machine learning. An important subclass are the Associative Markov Networks which are used in a wide variety of applications. For these networks a good approximate minimum cost…

Artificial Intelligence · Computer Science 2012-03-19 Chris Russell , L'ubor Ladicky , Pushmeet Kohli , Philip H. S. Torr

Combinatorial optimization problems arise in a wide range of applications from diverse domains. Many of these problems are NP-hard and designing efficient heuristics for them requires considerable time and experimentation. On the other…

Data Structures and Algorithms · Computer Science 2020-01-07 Juho Lauri , Sourav Dutta , Marco Grassia , Deepak Ajwani

Mining dense subgraphs on multi-layer graphs is an interesting problem, which has witnessed lots of applications in practice. To overcome the limitations of the quasi-clique-based approach, we propose d-coherent core (d-CC), a new notion of…

Databases · Computer Science 2017-10-03 Rong Zhu , Zhaonian Zou , Jianzhong Li

Community detection is crucial for analyzing social and biological networks, and comprehensive approaches have been proposed in the last two decades. Nevertheless, finding all overlapping communities in large networks that could accurately…

Social and Information Networks · Computer Science 2020-11-04 Yanhao Yang , Pan Shi , Yuyi Wang , Kun He

Current modularity-based community detection algorithms attempt to find cluster memberships that maximize modularity within a fixed graph topology. Diverging from this conventional approach, our work introduces a novel strategy that employs…

Data Analysis, Statistics and Probability · Physics 2024-02-27 Yongyu Wang , Shiqi Hao , Xiaoyang Wang , Xiaotian Zhuang

Constructing a spanning tree of a graph is one of the most basic tasks in graph theory. We consider a relaxed version of this problem in the setting of local algorithms. The relaxation is that the constructed subgraph is a sparse spanning…

Data Structures and Algorithms · Computer Science 2021-04-28 Reut Levi , Dana Ron , Ronitt Rubinfeld

Driven by many applications in graph analytics, the problem of computing $k$-edge connected components ($k$-ECCs) of a graph $G$ for a user-given $k$ has been extensively studied recently. In this paper, we investigate the problem of…

Data Structures and Algorithms · Computer Science 2017-11-29 Lijun Chang

Finding complete subgraphs in a graph, that is, cliques, is a key problem and has many real-world applications, e.g., finding communities in social networks, clustering gene expression data, modeling ecological niches in food webs, and…

Optimization and Control · Mathematics 2017-05-01 Melisew Tefera Belachew , Nicolas Gillis

Graph clustering, an important unsupervised problem, has been shown to be more resistant to advances in Graph Neural Networks (GNNs). In addition, almost all clustering methods focus on homophilic graphs and ignore heterophily. This…

Machine Learning · Computer Science 2026-03-11 Xuanting Xie , Erlin Pan , Zhao Kang , Wenyu Chen , Bingheng Li

Optimization problems consist of either maximizing or minimizing an objective function. Instead of looking for a maximum solution (resp. minimum solution), one can find a minimum maximal solution (resp. maximum minimal solution). Such…

Data Structures and Algorithms · Computer Science 2018-11-08 Kaveh Khoshkhah , Mehdi Khosravian Ghadikolaei , Jerome Monnot , Florian Sikora

This work considers clustering nodes of a largely incomplete graph. Under the problem setting, only a small amount of queries about the edges can be made, but the entire graph is not observable. This problem finds applications in…

Machine Learning · Computer Science 2021-10-04 Shahana Ibrahim , Xiao Fu

The monography presents a new algorithm for finding the clique of maximal length in a nonseparable graph. The algorithm is based on the properties of the representation of a clique as a subset of the set of cycles with a length of three,…

Discrete Mathematics · Computer Science 2024-10-30 Sergey Kurapov , Maxim Davidovsky

We present a new approach for improving motif scanning accuracy, based on analysis of in-between similarity. Given a set of motifs obtained from a scanning process, we construct an associated weighted graph. We also compute the expected…

Quantitative Methods · Quantitative Biology 2022-03-23 Braslav Rabar , Keti Nižetić , Pavle Goldstein

Complex networks often exhibit community structure, with communities corresponding to denser subgraphs in which nodes are closely linked. When modelling systems where interactions extend beyond node pairs to arbitrary numbers of nodes,…

Physics and Society · Physics 2025-10-16 Bianka Kovács , Barnabás Benedek , Gergely Palla

Modern graph or network datasets often contain rich structure that goes beyond simple pairwise connections between nodes. This calls for complex representations that can capture, for instance, edges of different types as well as so-called…

Social and Information Networks · Computer Science 2020-02-19 Ilya Amburg , Nate Veldt , Austin R. Benson

Finding the seed set that maximizes the influence spread over a network is a well-known NP-hard problem. Though a greedy algorithm can provide near-optimal solutions, the subproblem of influence estimation renders the solutions inefficient.…

Machine Learning · Computer Science 2023-10-17 George Panagopoulos , Nikolaos Tziortziotis , Michalis Vazirgiannis , Fragkiskos D. Malliaros

When we try to solve a system of linear equations, we can consider a simple iterative algorithm in which an equation including only one variable is chosen at each step, and the variable is fixed to the value satisfying the equation. The…

Discrete Mathematics · Computer Science 2015-06-03 Ryuhei Mori , Osamu Watanabe

Large real-world graphs tend to be sparse, but they often contain many densely connected subgraphs and exhibit high clustering coefficients. While recent random graph models can capture this sparsity, they ignore the local density, or vice…

Methodology · Statistics 2019-07-18 Sinead A. Williamson , Mauricio Tec