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The advent of enhanced technologies in radio interferometry and the perspective of the SKA telescope bring new challenges in image reconstruction. One of these challenges is the spatio-spectral reconstruction of large (Terabytes) data cubes…

Instrumentation and Methods for Astrophysics · Physics 2016-03-07 Jérémy Deguignet , André Ferrari , David Mary , Chiara Ferrari

High-resolution slice-to-volume reconstruction (SVR) from multiple motion-corrupted low-resolution 2D slices constitutes a critical step in image-based diagnostics of moving subjects, such as fetal brain Magnetic Resonance Imaging (MRI).…

Motion during acquisition of a set of projections can lead to significant motion artifacts in computed tomography reconstructions despite fast acquisition of individual views. In cases such as cardiac imaging, motion may be unavoidable and…

Image and Video Processing · Electrical Eng. & Systems 2022-01-19 Kunal Gupta , Brendan Colvert , Francisco Contijoch

Acoustic holographic lenses, also known as acoustic holograms, can change the phase of a transmitted wavefront in order to shape and construct complex ultrasound pressure fields, often for focusing the acoustic energy on a target region.…

Ultrasound super-localization microscopy techniques presented in the last few years enable non-invasive imaging of vascular structures at the capillary level by tracking the flow of ultrasound contrast agents (gas microbubbles). However,…

Tissues and Organs · Quantitative Biology 2016-08-10 Avinoam Bar-Zion , Charles Tremblay-Darveau , Oren Solomon , Dan Adam , Yonina C. Eldar

Aggregating multi-subject functional magnetic resonance imaging (fMRI) data is indispensable for generating valid and general inferences from patterns distributed across human brains. The disparities in anatomical structures and functional…

Machine Learning · Computer Science 2019-11-20 Weida Li , Mingxia Liu , Fang Chen , Daoqiang Zhang

In this work we present Polaffini, a robust and versatile framework for anatomically grounded registration. Medical image registration is dominated by intensity-based registration methods that rely on surrogate measures of alignment…

Computer Vision and Pattern Recognition · Computer Science 2026-02-20 Antoine Legouhy , Cosimo Campo , Ross Callaghan , Hojjat Azadbakht , Hui Zhang

Multi-modality (or multi-channel) imaging is becoming increasingly important and more widely available, e.g. hyperspectral imaging in remote sensing, spectral CT in material sciences as well as multi-contrast MRI and PET-MR in medicine.…

Image and Video Processing · Electrical Eng. & Systems 2020-12-25 Leon Bungert , Matthias J. Ehrhardt

In medical imaging it is common practice to acquire a wide range of modalities (MRI, CT, PET, etc.), to highlight different structures or pathologies. As patient movement between scans or scanning session is unavoidable, registration is…

Image and Video Processing · Electrical Eng. & Systems 2021-05-10 Mikael Brudfors , Yaël Balbastre , John Ashburner

Optical motion capture (mocap) requires accurately reconstructing the human body from retroreflective markers, including pose and shape. In a typical mocap setting, marker labeling is an important but tedious and error-prone step. Previous…

Computer Vision and Pattern Recognition · Computer Science 2024-07-09 Nicholas Milef , John Keyser , Shu Kong

Longitudinal brain analysis is essential for understanding healthy aging and identifying pathological deviations. Longitudinal registration of sequential brain MRI underpins such analyses. However, existing methods are limited by reliance…

Image and Video Processing · Electrical Eng. & Systems 2026-03-31 Bailiang Jian , Jiazhen Pan , Yitong Li , Fabian Bongratz , Ruochen Li , Daniel Rueckert , Benedikt Wiestler , Christian Wachinger

We present a fast learning-based algorithm for deformable, pairwise 3D medical image registration. Current registration methods optimize an objective function independently for each pair of images, which can be time-consuming for large…

Computer Vision and Pattern Recognition · Computer Science 2019-03-14 Guha Balakrishnan , Amy Zhao , Mert R. Sabuncu , John Guttag , Adrian V. Dalca

Localizing neuronal activity in the brain, both in time and in space, is a central challenge to advance the understanding of brain function. Because of the inability of any single neuroimaging techniques to cover all aspects at once, there…

Neurons and Cognition · Quantitative Biology 2013-07-09 Yaroslav O. Halchenko , Michael Hanke , James V. Haxby , Stephen Jose Hanson , Christoph S. Herrmann

Head pose estimation and tracking is useful in variety of medical applications. With the advent of RGBD cameras like Kinect, it has become feasible to do markerless tracking by estimating the head pose directly from the point clouds. One…

Computer Vision and Pattern Recognition · Computer Science 2018-07-11 Omer Rajput , Nils Gessert , Martin Gromniak , Lars Matthäus , Alexander Schlaefer

The integrated positron emission tomography/magnetic resonance imaging (PET/MRI) scanner facilitates the simultaneous acquisition of metabolic information via PET and morphological information with high soft-tissue contrast using MRI.…

Computer Vision and Pattern Recognition · Computer Science 2024-10-30 Hidetoshi Matsuo , Mizuho Nishio , Munenobu Nogami , Feibi Zeng , Takako Kurimoto , Sandeep Kaushik , Florian Wiesinger , Atsushi K Kono , Takamichi Murakami

Deciphering visual content from functional Magnetic Resonance Imaging (fMRI) helps illuminate the human vision system. However, the scarcity of fMRI data and noise hamper brain decoding model performance. Previous approaches primarily…

Computer Vision and Pattern Recognition · Computer Science 2024-06-14 Yulong Liu , Yongqiang Ma , Guibo Zhu , Haodong Jing , Nanning Zheng

We present MOFI, Manifold OF Images, a new vision foundation model designed to learn image representations from noisy entity annotated images. MOFI differs from previous work in two key aspects: (i) pre-training data, and (ii) training…

Computer Vision and Pattern Recognition · Computer Science 2024-03-19 Wentao Wu , Aleksei Timofeev , Chen Chen , Bowen Zhang , Kun Duan , Shuangning Liu , Yantao Zheng , Jonathon Shlens , Xianzhi Du , Zhe Gan , Yinfei Yang

Ultrasound-guided spine interventions, such as lumbar-puncture procedures, often suffer from the reduced visibility of key anatomical features such as the inter-spinous process space, due to the complex shape of the self-shadowing vertebra.…

Graphics · Computer Science 2022-11-14 Baichuan Jiang , Keshuai Xu , Abhay Moghekar , Peter Kazanzides , Emad Boctor

Handheld ultrasound devices face usage limitations due to user inexperience and cannot benefit from supervised deep learning without extensive expert annotations. Moreover, the models trained on standard ultrasound device data are…

Image and Video Processing · Electrical Eng. & Systems 2024-02-20 Hongye Zeng , Ke Zou , Zhihao Chen , Yuchong Gao , Hongbo Chen , Haibin Zhang , Kang Zhou , Meng Wang , Rick Siow Mong Goh , Yong Liu , Chang Jiang , Rui Zheng , Huazhu Fu

One of the fundamental challenges in supervised learning for multimodal image registration is the lack of ground-truth for voxel-level spatial correspondence. This work describes a method to infer voxel-level transformation from…

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