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Despite the state-of-the-art performance for medical image segmentation, deep convolutional neural networks (CNNs) have rarely provided uncertainty estimations regarding their segmentation outputs, e.g., model (epistemic) and image-based…

Computer Vision and Pattern Recognition · Computer Science 2019-02-12 Guotai Wang , Wenqi Li , Michael Aertsen , Jan Deprest , Sebastien Ourselin , Tom Vercauteren

Magnetic resonance imaging (MRI) is a potent diagnostic tool, but suffers from long examination times. To accelerate the process, modern MRI machines typically utilize multiple coils that acquire sub-sampled data in parallel. Data-driven…

Image and Video Processing · Electrical Eng. & Systems 2023-10-24 Moritz Erlacher , Martin Zach

Low-field magnetic resonance imaging (MRI) offers a cost-effective alternative for medical imaging in resource-limited settings. However, its widespread adoption is hindered by two key challenges: prolonged scan times and reduced image…

Computer Vision and Pattern Recognition · Computer Science 2026-03-17 Daniel Tweneboah Anyimadu , Mohammed Abdalla , Mohammed M. Abdelsamea , Ahmed Karam Eldaly

Uncertainty quantification for inverse problems in imaging has drawn much attention lately. Existing approaches towards this task define uncertainty regions based on probable values per pixel, while ignoring spatial correlations within the…

Computer Vision and Pattern Recognition · Computer Science 2024-01-23 Omer Belhasin , Yaniv Romano , Daniel Freedman , Ehud Rivlin , Michael Elad

In recent years, machine learning (ML) based reconstruction has been widely investigated and employed in cardiac magnetic resonance (CMR) imaging. ML-based reconstructions can deliver clinically acceptable image quality under substantially…

Image and Video Processing · Electrical Eng. & Systems 2024-11-18 Chi Zhang , Michael Loecher , Cagan Alkan , Mahmut Yurt , Shreyas S. Vasanawala , Daniel B. Ennis

Magnetic resonance imaging (MRI) nowadays serves as an important modality for diagnostic and therapeutic guidance in clinics. However, the {\it slow acquisition} process, the dynamic deformation of organs, as well as the need for {\it…

Machine Learning · Computer Science 2016-09-15 Morteza Mardani , Georgios B. Giannakis , Kamil Ugurbil

Parallel MRI is a fast imaging technique that enables the acquisition of highly resolved images in space. It relies on $k$-space undersampling and multiple receiver coils with complementary sensitivity profiles in order to reconstruct a…

In this work we introduce a new method that combines Parallel MRI and Compressed Sensing (CS) for accelerated image reconstruction from subsampled k-space data. The method first computes a convolved image, which gives the convolution…

Medical Physics · Physics 2021-09-20 Efrat Shimron , Andrew G. Webb , Haim Azhari

Purpose: To accelerate MRI acquisition by incorporating the previous scans of a subject during reconstruction. Although longitudinal imaging constitutes much of clinical MRI, leveraging previous scans is challenging due to the complex…

Image and Video Processing · Electrical Eng. & Systems 2025-10-21 Yonatan Urman , Zachary Shah , Ashwin Kumar , Bruno P. Soares , Kawin Setsompop

Convolutional autoencoders have emerged as popular methods for unsupervised defect segmentation on image data. Most commonly, this task is performed by thresholding a pixel-wise reconstruction error based on an $\ell^p$ distance. This…

Computer Vision and Pattern Recognition · Computer Science 2019-04-09 Paul Bergmann , Sindy Löwe , Michael Fauser , David Sattlegger , Carsten Steger

2D cine phase contrast (CPC) MRI provides quantitative information on blood velocity and flow within the human vasculature. However, data acquisition is time-consuming, motivating the reconstruction of the velocity field from undersampled…

Image and Video Processing · Electrical Eng. & Systems 2026-01-21 Pablo Arratia , Martin J. Graves , Mary McLean , Carolin Pirkl , Carola-Bibiane Schönlieb , Timo Schirmer , Florian Wiesinger , Matthias J. Ehrhardt

We consider the problem of precision matrix estimation where, due to extraneous confounding of the underlying precision matrix, the data are independent but not identically distributed. While such confounding occurs in many scientific…

Machine Learning · Statistics 2019-07-01 Sinong Geng , Mladen Kolar , Oluwasanmi Koyejo

Image restoration problems are often ill-posed, leading to significant uncertainty in reconstructed images. Accurately quantifying this uncertainty is essential for the reliable interpretation of reconstructed images. However, image…

Computer Vision and Pattern Recognition · Computer Science 2025-02-27 Bernardin Tamo Amougou , Marcelo Pereyra , Barbara Pascal

Uncertainty quantification is a critical missing component in radio interferometric imaging that will only become increasingly important as the big-data era of radio interferometry emerges. Since radio interferometric imaging requires…

Instrumentation and Methods for Astrophysics · Physics 2018-09-12 Xiaohao Cai , Marcelo Pereyra , Jason D. McEwen

Partial scan is a common approach to accelerate Magnetic Resonance Imaging (MRI) data acquisition in both 2D and 3D settings. However, accurately reconstructing images from partial scan data (i.e., incomplete k-space matrices) remains…

Image and Video Processing · Electrical Eng. & Systems 2023-06-06 Xiaohan Liu , Yanwei Pang , Xuebin Sun , Yiming Liu , Yonghong Hou , Zhenchang Wang , Xuelong Li

Speed-of-sound is a biomechanical property for quantitative tissue differentiation, with great potential as a new ultrasound-based image modality. A conventional ultrasound array transducer can be used together with an acoustic mirror, or…

Computer Vision and Pattern Recognition · Computer Science 2018-07-20 Valery Vishnevskiy , Sergio J Sanabria , Orcun Goksel

Purpose: In multi-spectral imaging (MSI), several fast spin echo volumes with discrete Larmor frequency offsets are acquired in an interleaved fashion with multiple concatenations. Here, a variable resolution (VR) method to nearly halve…

Medical Physics · Physics 2023-06-06 Nikolai J. Mickevicius , Azadeh Sharafi , Andrew S. Nencka , Kevin M. Koch

In safety-critical applications like medical diagnosis, certainty associated with a model's prediction is just as important as its accuracy. Consequently, uncertainty estimation and reduction play a crucial role. Uncertainty in predictions…

Image and Video Processing · Electrical Eng. & Systems 2023-09-12 Abhishek Singh Sambyal , Narayanan C. Krishnan , Deepti R. Bathula

The integration of compressed sensing and parallel imaging (CS-PI) provides a robust mechanism for accelerating MRI acquisitions. However, most such strategies require the explicit formation of either coil sensitivity profiles or a…

Computer Vision and Pattern Recognition · Computer Science 2022-01-26 Wanqing Zhu , Bing Guan , Shanshan Wang , Minghui Zhang , Qiegen Liu

Objective: Non-rigid image registration with high accuracy and efficiency is still a challenging task for medical image analysis. In this work, we present the spatially region-weighted correlation ratio (SRWCR) as a novel similarity measure…

Methodology · Statistics 2018-04-17 Lun Gong , Cheng Zhang , Luwen Duan , Xueying Du , Hanqiu Liu , Xinjian Chen , Jian Zheng