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Multiple signal classification algorithm (MUSICAL) provides a super-resolution microscopy method. In the previous research, MUSICAL has enabled data-parallelism well on a desktop computer or a Linux-based server. However, the running time…

Distributed, Parallel, and Cluster Computing · Computer Science 2022-06-14 Quan Do , Jon Ivar Kristiansen , Krishna Agarwal , Phuong Hoai Ha

With the increase in multimedia content, the type of distortions associated with multimedia is also increasing. This problem of image quality assessment is expanded well in the PIPAL dataset, which is still an open problem to solve for…

Computer Vision and Pattern Recognition · Computer Science 2022-04-22 Abhisek Keshari , Komal , Sadbhawna , Badri Subudhi

We present the open-source image processing software package PySAP (Python Sparse data Analysis Package) developed for the COmpressed Sensing for Magnetic resonance Imaging and Cosmology (COSMIC) project. This package provides a set of…

Instrumentation and Methods for Astrophysics · Physics 2020-07-03 S. Farrens , A. Grigis , L. El Gueddari , Z. Ramzi , Chaithya G. R. , S. Starck , B. Sarthou , H. Cherkaoui , P. Ciuciu , J. -L. Starck

Recent dual in-line memory modules (DIMMs) are starting to support processing-in-memory (PIM) by associating their memory banks with processing elements (PEs), allowing applications to overcome the data movement bottleneck by offloading…

Distributed, Parallel, and Cluster Computing · Computer Science 2024-04-16 Si Ung Noh , Junguk Hong , Chaemin Lim , Seongyeon Park , Jeehyun Kim , Hanjun Kim , Youngsok Kim , Jinho Lee

Contrastive Language-Image Pre-training (CLIP), which excels at abstracting open-world representations across domains and modalities, has become a foundation for a variety of vision and multimodal tasks. However, recent studies reveal that…

Computer Vision and Pattern Recognition · Computer Science 2024-08-27 Wenxuan Wang , Quan Sun , Fan Zhang , Yepeng Tang , Jing Liu , Xinlong Wang

pyGDM is a python toolkit for electro-dynamical simulations in nano-optics based on the Green Dyadic Method (GDM). In contrast to most other coupled-dipole codes, pyGDM uses a generalized propagator, which allows to cost-efficiently solve…

Computational Physics · Physics 2020-01-28 Peter R. Wiecha

Many medical imaging techniques utilize fitting approaches for quantitative parameter estimation and analysis. Common examples are pharmacokinetic modeling in DCE MRI/CT, ADC calculations and IVIM modeling in diffusion-weighted MRI and…

Leveraging medical record information in the era of big data and machine learning comes with the caveat that data must be cleaned and de-identified. Facilitating data sharing and harmonization for multi-center collaborations are…

Image and Video Processing · Electrical Eng. & Systems 2023-05-11 Adrienne Kline , Vinesh Appadurai , Yuan Luo , Sanjiv Shah

The direct detection and characterization of planetary and substellar companions at small angular separations is a rapidly advancing field. Dedicated high-contrast imaging instruments deliver unprecedented sensitivity, enabling detailed…

Earth and Planetary Astrophysics · Physics 2019-01-25 Tomas Stolker , Markus J. Bonse , Sascha P. Quanz , Adam Amara , Gabriele Cugno , Alexander J. Bohn , Anna Boehle

Motivation: The ability to perform operations on encrypted data has a growing number of applications in bioinformatics, with implications for data privacy in health care and biosecurity. The SEAL library is a popular implementation of fully…

Quantitative Methods · Quantitative Biology 2018-03-07 Alexander J. Titus , Shashwat Kishore , Todd Stavish , Stephanie M. Rogers , Karl Ni

This work describes the setup of an advanced technical infrastructure for collaborative software development (CDE) in large, distributed projects based on GitLab. We present its customization and extension, additional features and processes…

Software Engineering · Computer Science 2023-08-10 Felix Bach , Jochen Klar , Axel Loewe , Jorge Sánchez , Gunnar Seemann , Yung-Lin Huang , Robert Ulrich

PymePix is a new Python 3 library that provides control and acquisition for the Timepix3-SPIDR hardware. The rich set of data-structures and intuitive routines reduces time and coding effort to quickly configure, acquire, and visualize data…

While results visualization is a critical phase to the communication of new academic results, plots are frequently shared without the complete combination of code, input data, execution context and outputs required to independently…

Software Engineering · Computer Science 2026-03-24 Gabriele Padovani , Sandro Fiore

In this work we introduce repro_eval - a tool for reactive reproducibility studies of system-oriented information retrieval (IR) experiments. The corresponding Python package provides IR researchers with measures for different levels of…

Information Retrieval · Computer Science 2022-01-20 Timo Breuer , Nicola Ferro , Maria Maistro , Philipp Schaer

Mayavi is an open-source, general-purpose, 3D scientific visualization package. It seeks to provide easy and interactive tools for data visualization that fit with the scientific user's workflow. For this purpose, Mayavi provides several…

Software Engineering · Computer Science 2011-03-14 Prabhu Ramachandran , Gaël Varoquaux

Diffusion models have shown remarkable success in visual synthesis, but have also raised concerns about potential abuse for malicious purposes. In this paper, we seek to build a detector for telling apart real images from…

Computer Vision and Pattern Recognition · Computer Science 2023-03-17 Zhendong Wang , Jianmin Bao , Wengang Zhou , Weilun Wang , Hezhen Hu , Hong Chen , Houqiang Li

Satellites continuously generate massive volumes of data, particularly for Earth observation, including satellite image time series (SITS). However, most deep learning models are designed to process either entire images or complete time…

Computer Vision and Pattern Recognition · Computer Science 2026-01-08 Leandro Stival , Ricardo da Silva Torres , Helio Pedrini

We present OpenICS, an image compressive sensing toolbox that includes multiple image compressive sensing and reconstruction algorithms proposed in the past decade. Due to the lack of standardization in the implementation and evaluation of…

Computer Vision and Pattern Recognition · Computer Science 2021-05-10 Jonathan Zhao , Matthew Westerham , Mark Lakatos-Toth , Zhikang Zhang , Avi Moskoff , Fengbo Ren

Scientific discoveries are increasingly driven by analyzing large volumes of image data. Many new libraries and specialized database management systems (DBMSs) have emerged to support such tasks. It is unclear, however, how well these…

Message Passing Interface (MPI) plays a crucial role in distributed memory parallelization across multiple nodes. However, parallelizing MPI code manually, and specifically, performing domain decomposition, is a challenging, error-prone…

Distributed, Parallel, and Cluster Computing · Computer Science 2023-08-31 Nadav Schneider , Tal Kadosh , Niranjan Hasabnis , Timothy Mattson , Yuval Pinter , Gal Oren