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Related papers: Docker Does Not Guarantee Reproducibility

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How many times have you tried to re-implement a past CAV tool paper, and failed? Reliably reproducing published scientific discoveries has been acknowledged as a barrier to scientific progress for some time but there remains only a small…

Logic in Computer Science · Computer Science 2015-02-10 Tom Crick , Benjamin A. Hall , Samin Ishtiaq

This paper investigates the reproducibility of computational science research and identifies key challenges facing the community today. It is the result of the First Summer School on Experimental Methodology in Computational Science…

Reproducibility of computational studies is a hallmark of scientific methodology. It enables researchers to build with confidence on the methods and findings of others, reuse and extend computational pipelines, and thereby drive scientific…

With the success of deep learning techniques in a broad range of application domains, many deep learning software frameworks have been developed and are being updated frequently to adapt to new hardware features and software libraries,…

Distributed, Parallel, and Cluster Computing · Computer Science 2017-11-10 Pengfei Xu , Shaohuai Shi , Xiaowen Chu

Edge computing addresses critical limitations of cloud computing such as high latency and network congestion by decentralizing processing from cloud to the edge. However, the need for software replication across heterogeneous edge devices…

Performance · Computer Science 2025-05-09 Ragini Gupta , Klara Nahrstedt

While experimental reproduction remains a pillar of the scientific method, we observe that the software best practices supporting the reproduction of machine learning ( ML ) research are often undervalued or overlooked, leading both to poor…

Software Engineering · Computer Science 2025-09-03 Moritz Wolter , Lokesh Veeramacheneni , Charles Tapley Hoyt

Docker seems to be an attractive solution for cloud database benchmarking as it simplifies the setup process through pre-built images that are portable and simple to maintain. However, the usage of Docker for benchmarking is only valid if…

Distributed, Parallel, and Cluster Computing · Computer Science 2018-12-12 Martin Grambow , Jonathan Hasenburg , Tobias Pfandzelter , David Bermbach

Platforms like Stack Overflow and GitHub's gist system promote the sharing of ideas and programming techniques via the distribution of code snippets designed to illustrate particular tasks. Python, a popular and fast-growing programming…

Software Engineering · Computer Science 2019-05-28 Eric Horton , Chris Parnin

Scientists rely on simulations to study natural phenomena. Trusting the simulation results is vital to develop sciences in any field. One approach to build trust is to ensure the reproducibility and traceability of the simulations through…

Distributed, Parallel, and Cluster Computing · Computer Science 2020-09-21 Paula Olaya , Jay Lofstead , Michela Taufer

Comparative evaluation of several systems is a recurrent task in researching. It is a key step before deciding which system to use for our work, or, once our research has been conducted, to demonstrate the potential of the resulting model.…

Computation and Language · Computer Science 2026-02-24 Sergio Gómez González , Miguel Domingo , Francisco Casacuberta

The ubiquity of computation in modern scientific research inflicts new challenges for reproducibility. While most journals now require code and data be made available, the standards for organization, annotation, and validation remain lax,…

Other Quantitative Biology · Quantitative Biology 2022-10-07 Griffin Chure

Dockerfiles are one of the most prevalent kinds of DevOps artifacts used in industry. Despite their prevalence, there is a lack of sophisticated semantics-aware static analysis of Dockerfiles. In this paper, we introduce a dataset of…

Software Engineering · Computer Science 2020-03-31 Jordan Henkel , Christian Bird , Shuvendu K. Lahiri , Thomas Reps

The HPC community is actively researching and evaluating tools to support execution of scientific applications in cloud-based environments. Among the various technologies, containers have recently gained importance as they have…

Performance · Computer Science 2019-05-23 Pankaj Saha , Angel Beltre , Piotr Uminski , Madhusudhan Govindaraju

Linux container technologies such as Docker and Singularity offer encapsulated environments for easy execution of software. In high performance computing, this is especially important for evolving and complex software stacks with…

Operating Systems · Computer Science 2022-12-15 Vanessa Sochat , Matthieu Muffato , Audrey Stott , Marco De La Pierre , Georgia Stuart

In the rapidly evolving field of cybersecurity, ensuring the reproducibility of AI-driven research is critical to maintaining the reliability and integrity of security systems. This paper addresses the reproducibility crisis within the…

Machine Learning · Computer Science 2024-12-17 Richard H. Moulton , Gary A. McCully , John D. Hastings

Many research groups aspire to make data and code FAIR and reproducible, yet struggle because the data and code life cycles are disconnected, executable environments are often missing from published work, and technical skill requirements…

Dockerfile flakiness-unpredictable temporal build failures caused by external dependencies and evolving environments-undermines deployment reliability and increases debugging overhead. Unlike traditional Dockerfile issues, flakiness occurs…

Software Engineering · Computer Science 2025-02-13 Taha Shabani , Noor Nashid , Parsa Alian , Ali Mesbah

Open data and open-source software may be part of the solution to science's "reproducibility crisis", but they are insufficient to guarantee reproducibility. Requiring minimal end-user expertise, encapsulator creates a "time capsule" with…

Although reproducibility is a core tenet of the scientific method, it remains challenging to reproduce many results. Surprisingly, this also holds true for computational results in domains such as systems biology where there have been…

Quantitative Methods · Quantitative Biology 2021-04-13 Michael L. Blinov , John H. Gennari , Jonathan R. Karr , Ion I. Moraru , David P. Nickerson , Herbert M. Sauro

Various fields of science face a reproducibility crisis. For quantum software engineering as an emerging field, it is therefore imminent to focus on proper reproducibility engineering from the start. Yet the provision of reproduction…

Software Engineering · Computer Science 2022-01-31 Wolfgang Mauerer , Stefanie Scherzinger