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In this paper, we derive mutual information based upper and lower bounds on the number of nonadaptive group tests required to identify a given number of "non defective" items from a large population containing a small number of "defective"…

Information Theory · Computer Science 2016-03-01 Abhay Sharma , Chandra R. Murthy

We describe a generalization of the group testing problem termed symmetric group testing. Unlike in classical binary group testing, the roles played by the input symbols zero and one are "symmetric" while the outputs are drawn from a…

Information Theory · Computer Science 2011-08-16 Amin Emad , Jun Shen , Olgica Milenkovic

Detection of defective members of large populations has been widely studied in the statistics community under the name "group testing", a problem which dates back to World War II when it was suggested for syphilis screening. There the main…

Information Theory · Computer Science 2009-09-28 Mahdi Cheraghchi , Ali Hormati , Amin Karbasi , Martin Vetterli

Consider a very large (infinite) population of items, where each item independent from the others is defective with probability p, or good with probability q=1-p. The goal is to identify N good items as quickly as possible. The following…

Other Statistics · Statistics 2018-04-17 Yaakov Malinovsky

Motivated by testing for pathogenic diseases we consider a new nonadaptive group testing problem for which: (1) positives occur within a burst, capturing the fact that infected test subjects often come in clusters, and (2) that the test…

Information Theory · Computer Science 2023-04-05 Yun-Han Li , Ryan Gabrys , Jin Sima , Ilan Shomorony , Olgica Milenkovic

We study the group testing problem with non-adaptive randomized algorithms. Several models have been discussed in the literature to determine how to randomly choose the tests. For a model ${\cal M}$, let $m_{\cal M}(n,d)$ be the minimum…

Machine Learning · Computer Science 2019-11-06 Nader H. Bshouty , George Haddad , Catherine A. Haddad-Zaknoon

In this paper, we consider the problem of noiseless non-adaptive probabilistic group testing, in which the goal is high-probability recovery of the defective set. We show that in the case of $n$ items among which $k$ are defective, the…

Information Theory · Computer Science 2021-07-30 Wei Heng Bay , Eric Price , Jonathan Scarlett

In applications of group testing in networks, e.g. identifying individuals who are infected by a disease spread over a network, exploiting correlation among network nodes provides fundamental opportunities in reducing the number of tests…

Information Theory · Computer Science 2023-03-21 Hesam Nikpey , Jungyeol Kim , Xingran Chen , Saswati Sarkar , Shirin Saeedi Bidokhti

In combinatorial group testing (CGT), the objective is to identify the set of at most $d$ defective items from a pool of $n$ items using as few tests as possible. The celebrated result for the CGT problem is that the number of tests $t$ can…

Information Theory · Computer Science 2019-01-29 Huseyin A. Inan , Peter Kairouz , Ayfer Ozgur

Recent advances in noiseless non-adaptive group testing have led to a precise asymptotic characterization of the number of tests required for high-probability recovery in the sublinear regime $k = n^{\theta}$ (with $\theta \in (0,1)$), with…

Data Structures and Algorithms · Computer Science 2021-12-24 Oliver Gebhard , Max Hahn-Klimroth , Olaf Parczyk , Manuel Penschuck , Maurice Rolvien , Jonathan Scarlett , Nelvin Tan

Group testing has recently attracted significant attention from the research community due to its applications in diagnostic virology. An instance of the group testing problem includes a ground set of individuals which includes a small…

Information Theory · Computer Science 2022-02-25 Esmaeil Karimi , Anoosheh Heidarzadeh , Krishna R. Narayanan , Alex Sprintson

In the group testing problem we aim to identify a small number of infected individuals within a large population. We avail ourselves to a procedure that can test a group of multiple individuals, with the test result coming out positive iff…

Discrete Mathematics · Computer Science 2021-05-14 Amin Coja-Oghlan , Oliver Gebhard , Max Hahn-Klimroth , Philipp Loick

We consider the problem of detecting a small subset of defective items from a large set via non-adaptive "random pooling" group tests. We consider both the case when the measurements are noiseless, and the case when the measurements are…

Information Theory · Computer Science 2011-07-25 Chun Lam Chan , Pak Hou Che , Sidharth Jaggi , Venkatesh Saligrama

We study the inference problem in the group testing to identify defective items from the perspective of the decision theory. We introduce Bayesian inference and consider the Bayesian optimal setting in which the true generative process of…

Information Theory · Computer Science 2021-10-22 Ayaka Sakata , Yoshiyuki Kabashima

We have a large number of samples and we want to find the infected ones using as few number of tests as possible. We can use group testing which tells about a small group of people whether at least one of them is infected. Group testing is…

Quantitative Methods · Quantitative Biology 2020-05-07 Endre Csóka

Group testing tackles the problem of identifying a population of $K$ defective items from a set of $n$ items by pooling groups of items efficiently in order to cut down the number of tests needed. The result of a test for a group of items…

Information Theory · Computer Science 2015-08-20 Kangwook Lee , Ramtin Pedarsani , Kannan Ramchandran

We study Probabilistic Group Testing of a set of N items each of which is defective with probability p. We focus on the double limit of small defect probability, p<<1, and large number of variables, N>>1, taking either p->0 after…

Data Structures and Algorithms · Computer Science 2007-11-14 Marc Mezard , Cristina Toninelli

Non-adaptive group testing involves grouping arbitrary subsets of $n$ items into different pools. Each pool is then tested and defective items are identified. A fundamental question involves minimizing the number of pools required to…

Discrete Mathematics · Computer Science 2011-07-26 Mahdi Cheraghchi , Amin Karbasi , Soheil Mohajer , Venkatesh Saligrama

We consider the probabilistic group testing problem where $d$ random defective items in a large population of $N$ items are identified with high probability by applying binary tests. It is known that $\Theta(d \log N)$ tests are necessary…

Information Theory · Computer Science 2019-02-27 Huseyin A. Inan , Peter Kairouz , Mary Wootters , Ayfer Ozgur

An instance of a group testing problem is a set of objects $\cO$ and an unknown subset $P$ of $\cO$. The task is to determine $P$ by using queries of the type ``does $P$ intersect $Q$'', where $Q$ is a subset of $\cO$. This problem occurs…

Combinatorics · Mathematics 2016-09-06 Emanuel Knill
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