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Understanding the encoding and decoding mechanisms of dynamic neural responses to different visual stimuli is an important topic in exploring how the brain represents visual information. Currently, hierarchically deep neural networks (DNNs)…

Neurons and Cognition · Quantitative Biology 2025-12-24 Jingyi Feng , Xiang Feng

Recognition of objects from partial information presents a significant challenge for theories of vision because it requires spatial integration and extrapolation from prior knowledge. We combined neurophysiological recordings in human…

Neurons and Cognition · Quantitative Biology 2014-09-11 Hanlin Tang , Calin Buia , Joseph Madsen , William S. Anderson , Gabriel Kreiman

Retinal circuitry transforms spatiotemporal patterns of light into spiking activity of ganglion cells, which provide the sole visual input to the brain. Recent advances have led to a detailed characterization of retinal activity and…

Neurons and Cognition · Quantitative Biology 2016-05-12 Vicente Botella-Soler , Stéphane Deny , Olivier Marre , Gašper Tkačik

Spiking Neural Networks (SNNs), with their event-driven and biologically inspired operation, are well-suited for energy-efficient neuromorphic hardware. Neural coding, critical to SNNs, determines how information is represented via spikes.…

Neural and Evolutionary Computing · Computer Science 2025-03-11 Kaiwei Che , Wei Fang , Zhengyu Ma , Yifan Huang , Peng Xue , Li Yuan , Timothée Masquelier , Yonghong Tian

Decoding sensory experiences from neural activity to reconstruct human-perceived visual stimuli and semantic content remains a challenge in neuroscience and artificial intelligence. Despite notable progress in current brain decoding models,…

Neurons and Cognition · Quantitative Biology 2025-10-13 Feihan Feng , Jingxin Nie

Functional MRI (fMRI) has become the most common method for investigating the human brain. However, fMRI data present some complications for statistical analysis and modeling. One recently developed approach to these data focuses on…

Applications · Statistics 2015-03-19 Vincent Q. Vu , Pradeep Ravikumar , Thomas Naselaris , Kendrick N. Kay , Jack L. Gallant , Bin Yu

Primary visual cortex (V1) is the first stage of cortical image processing, and a major effort in systems neuroscience is devoted to understanding how it encodes information about visual stimuli. Within V1, many neurons respond selectively…

Neurons and Cognition · Quantitative Biology 2017-06-21 William F. Kindel , Elijah D. Christensen , Joel Zylberberg

Precortical neural systems encode information collected by the senses, but the driving principles of the encoding used have remained a subject of debate. We present a model of retinal coding that is based on three constraints: information…

Neurons and Cognition · Quantitative Biology 2016-04-08 Honghao Shan , Matthew H. Tong , Garrison W. Cottrell

Cognitive brain imaging is accumulating datasets about the neural substrate of many different mental processes. Yet, most studies are based on few subjects and have low statistical power. Analyzing data across studies could bring more…

Machine Learning · Statistics 2021-05-20 Arthur Mensch , Julien Mairal , Bertrand Thirion , Gaël Varoquaux

Brain decoding involves the determination of a subject's cognitive state or an associated stimulus from functional neuroimaging data measuring brain activity. In this setting the cognitive state is typically characterized by an element of a…

Machine Learning · Statistics 2015-04-14 Nicole Croteau , Farouk S. Nathoo , Jiguo Cao , Ryan Budney

Recent studies have shown how spiking networks can learn complex functionality through error-correcting plasticity, but the resulting structures and dynamics remain poorly studied. To elucidate how these models may link to observed dynamics…

Neurons and Cognition · Quantitative Biology 2025-08-19 Jonas Oberste-Frielinghaus , Anno C. Kurth , Julian Göltz , Laura Kriener , Junji Ito , Mihai A. Petrovici , Sonja Grün

Sparse coding algorithms trained on natural images can accurately predict the features that excite visual cortical neurons, but it is not known whether such codes can be learned using biologically realistic plasticity rules. We have…

Neurons and Cognition · Quantitative Biology 2011-11-01 Joel Zylberberg , Jason Timothy Murphy , Michael Robert DeWeese

The integration of deep learning and neuroscience has been advancing rapidly, which has led to improvements in the analysis of brain activity and the understanding of deep learning models from a neuroscientific perspective. The…

Neurons and Cognition · Quantitative Biology 2023-06-21 Yu Takagi , Shinji Nishimoto

The representation of images in the brain is known to be sparse. That is, as neural activity is recorded in a visual area ---for instance the primary visual cortex of primates--- only a few neurons are active at a given time with respect to…

Computer Vision and Pattern Recognition · Computer Science 2017-01-25 Laurent Perrinet

The human visual system is an intricate network of brain regions that enables us to recognize the world around us. Despite its abundant lateral and feedback connections, object processing is commonly viewed and studied as a feedforward…

Neurons and Cognition · Quantitative Biology 2019-10-09 Tim C Kietzmann , Courtney J Spoerer , Lynn Sörensen , Radoslaw M Cichy , Olaf Hauk , Nikolaus Kriegeskorte

Computational modeling is becoming a widely used methodology in modern neuroscience. However, as the complexity of the phenomena under study increases, the analysis of the results emerging from the simulations concomitantly becomes more…

Neurons and Cognition · Quantitative Biology 2020-03-16 Sergio E. Galindo , Pablo Toharia , Oscar D. Robles , Eduardo Ros , Luis Pastor , Jesús A. Garrido

Decoding behavior, perception, or cognitive state directly from neural signals has applications in brain-computer interface research as well as implications for systems neuroscience. In the last decade, deep learning has become the…

Neurons and Cognition · Quantitative Biology 2020-05-21 Jesse A. Livezey , Joshua I. Glaser

Achieving fast and reliable temporal signal encoding is crucial for low-power, always-on systems. While current spike-based encoding algorithms rely on complex networks or precise timing references, simple and robust encoding models can be…

Neural and Evolutionary Computing · Computer Science 2025-04-23 Filippo Costa , Chiara De Luca

A core challenge for the brain is to process information across various timescales. This could be achieved by a hierarchical organization of temporal processing through intrinsic mechanisms (e.g., recurrent coupling or adaptation), but…

Neurons and Cognition · Quantitative Biology 2024-01-18 Lucas Rudelt , Daniel González Marx , F. Paul Spitzner , Benjamin Cramer , Johannes Zierenberg , Viola Priesemann

Understanding how the brain encodes visual information is a central challenge in neuroscience and machine learning. A promising approach is to reconstruct visual stimuli, essentially images, from functional Magnetic Resonance Imaging (fMRI)…

Computer Vision and Pattern Recognition · Computer Science 2026-05-15 Zheng Huang , Enpei Zhang , Weikang Qiu , Yinghao Cai , Carl Yang , Elynn Chen , Xiang Zhang , Rex Ying , Dawei Zhou , Yujun Yan