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Automated recognition and classification of bacteria species from microscopic images have significant importance in clinical microbiology. Bacteria classification is usually carried out manually by biologists using different shapes and…

Quantitative Methods · Quantitative Biology 2019-12-19 Muhammed Talo

Deep convolutional neural networks (CNNs) have achieved remarkable success in various fields. However, training an excellent CNN is practically a trial-and-error process that consumes a tremendous amount of time and computer resources. To…

Computer Vision and Pattern Recognition · Computer Science 2018-08-28 Dongyu Liu , Weiwei Cui , Kai Jin , Yuxiao Guo , Huamin Qu

Human motion modeling is a classic problem in computer vision and graphics. Challenges in modeling human motion include high dimensional prediction as well as extremely complicated dynamics.We present a novel approach to human motion…

Computer Vision and Pattern Recognition · Computer Science 2018-05-03 Chen Li , Zhen Zhang , Wee Sun Lee , Gim Hee Lee

One of the challenges of full autonomy is to have a robot capable of manipulating its current environment to achieve another environment configuration. This paper is a step towards this challenge, focusing on the visual understanding of the…

Robotics · Computer Science 2020-11-24 Guilherme Maeda , Joni Väätäinen , Hironori Yoshida

Cells are the fundamental unit of biological organization, and identifying them in imaging data - cell segmentation - is a critical task for various cellular imaging experiments. While deep learning methods have led to substantial progress…

Deep Learning has driven recent and exciting progress in computer vision, instilling the belief that these algorithms could solve any visual task. Yet, datasets commonly used to train and test computer vision algorithms have pervasive…

Computer Vision and Pattern Recognition · Computer Science 2020-04-01 Vincent Jacquot , Zhuofan Ying , Gabriel Kreiman

Cell segmentation for multi-modal microscopy images remains a challenge due to the complex textures, patterns, and cell shapes in these images. To tackle the problem, we first develop an automatic cell classification pipeline to label the…

Computer Vision and Pattern Recognition · Computer Science 2023-10-24 Wei Lou , Xinyi Yu , Chenyu Liu , Xiang Wan , Guanbin Li , Siqi Liu , Haofeng Li

Perceiving the world in terms of objects and tracking them through time is a crucial prerequisite for reasoning and scene understanding. Recently, several methods have been proposed for unsupervised learning of object-centric…

Computer Vision and Pattern Recognition · Computer Science 2021-08-18 Marissa A. Weis , Kashyap Chitta , Yash Sharma , Wieland Brendel , Matthias Bethge , Andreas Geiger , Alexander S. Ecker

Multiview clustering (MVC) aims to reveal the underlying structure of multiview data by categorizing data samples into clusters. Deep learning-based methods exhibit strong feature learning capabilities on large-scale datasets. For most…

Computer Vision and Pattern Recognition · Computer Science 2024-01-30 Jie Chen , Hua Mao , Wai Lok Woo , Xi Peng

Skin cancer, the most common human malignancy, is primarily diagnosed visually by physicians [1]. Classification with an automated method like CNN [2, 3] shows potential for challenging tasks [1]. By now, the deep convolutional neural…

Computer Vision and Pattern Recognition · Computer Science 2017-03-13 Wenhao Zhang , Liangcai Gao , Runtao Liu

A shared goal of several machine learning communities like continual learning, meta-learning and transfer learning, is to design algorithms and models that efficiently and robustly adapt to unseen tasks. An even more ambitious goal is to…

Deep learning models, specifically convolutional neural networks, have transformed the landscape of image classification by autonomously extracting features directly from raw pixel data. This article introduces an innovative image…

Image and Video Processing · Electrical Eng. & Systems 2024-12-19 Fatemeh Froughirad , Reza Bakhoda Eshtivani , Hamed Khajavi , Amir Rastgoo

Representation learning has driven major advances in natural image analysis by enabling models to acquire high-level semantic features. In microscopy imaging, however, it remains unclear what current representation learning methods actually…

Computer Vision and Pattern Recognition · Computer Science 2026-03-17 Ivan Svatko , Maxime Sanchez , Ihab Bendidi , Gilles Cottrell , Auguste Genovesio

Over many decades, researchers working in object recognition have longed for an end-to-end automated system that will simply accept 2D or 3D image or videos as inputs and output the labels of objects in the input data. Computer vision…

Computer Vision and Pattern Recognition · Computer Science 2016-01-29 Rama Chellappa , Jun-Cheng Chen , Rajeev Ranjan , Swami Sankaranarayanan , Amit Kumar , Vishal M. Patel , Carlos D. Castillo

Continual learning (CL) is essential for deploying medical image segmentation models in clinical environments where imaging domains, anatomical targets, and diagnostic tasks evolve over time. However, continual segmentation still faces…

Computer Vision and Pattern Recognition · Computer Science 2026-05-08 Bomin Wang , Hangqi Zhou , Yibo Gao , Xiahai Zhuang

Machine learning techniques face numerous challenges to achieve optimal performance. These include computational constraints, the limitations of single-view learning algorithms and the complexity of processing large datasets from different…

Machine Learning · Computer Science 2025-12-08 Abdelmalik Moujahid , Fadi Dornaika

This paper presents a method for time-lapse 3D cell analysis. Specifically, we consider the problem of accurately localizing and quantitatively analyzing sub-cellular features, and for tracking individual cells from time-lapse 3D confocal…

Computer Vision and Pattern Recognition · Computer Science 2022-08-18 Jiaxiang Jiang , Amil Khan , S. Shailja , Samuel A. Belteton , Michael Goebel , Daniel B. Szymanski , B. S. Manjunath

Action visual tempo characterizes the dynamics and the temporal scale of an action, which is helpful to distinguish human actions that share high similarities in visual dynamics and appearance. Previous methods capture the visual tempo…

Computer Vision and Pattern Recognition · Computer Science 2022-07-13 Yuanzhong Liu , Junsong Yuan , Zhigang Tu

Cellular processes are governed by macromolecular complexes inside the cell. Study of the native structures of macromolecular complexes has been extremely difficult due to lack of data. With recent breakthroughs in Cellular electron cryo…

Quantitative Methods · Quantitative Biology 2018-06-12 Chengqian Che , Ruogu Lin , Xiangrui Zeng , Karim Elmaaroufi , John Galeotti , Min Xu

The main challenges limiting the adoption of deep learning-based solutions in medical workflows are the availability of annotated data and the lack of interpretability of such systems. Concept Bottleneck Models (CBMs) tackle the latter by…

Computer Vision and Pattern Recognition · Computer Science 2025-10-07 Cristiano Patrício , Isabel Rio-Torto , Jaime S. Cardoso , Luís F. Teixeira , João C. Neves