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Code generation models based on large language models (LLMs) have gained wide adoption, but challenges remain in ensuring safety, accuracy, and controllability, especially for complex tasks. Existing methods often lack dynamic integration…

Software Engineering · Computer Science 2025-10-13 Aofan Liu , Haoxuan Li , Bin Wang , Ao Yang , Hui Li

Grammar plays a critical role in natural language processing and text/code generation by enabling the definition of syntax, the creation of parsers, and guiding structured outputs. Although large language models (LLMs) demonstrate…

Artificial Intelligence · Computer Science 2025-06-03 Weizhi Tang , Yixuan Li , Chris Sypherd , Elizabeth Polgreen , Vaishak Belle

Molecular property prediction is crucial for drug discovery and materials science, yet existing approaches suffer from limited interpretability, poor cross-task generalization, and lack of chemical reasoning capabilities. Traditional…

Machine Learning · Computer Science 2025-10-20 Jiaxi Zhuang , Yaorui Shi , Jue Hou , Yunong He , Mingwei Ye , Mingjun Xu , Yuming Su , Linfeng Zhang , Ying Qian , Linfeng Zhang , Guolin Ke , Hengxing Cai

Large language models (LLMs) have achieved great success in many fields, and recent works have studied exploring LLMs for graph discriminative tasks such as node classification. However, the abilities of LLMs for graph generation remain…

Machine Learning · Computer Science 2024-03-22 Yang Yao , Xin Wang , Zeyang Zhang , Yijian Qin , Ziwei Zhang , Xu Chu , Yuekui Yang , Wenwu Zhu , Hong Mei

Data incompleteness severely impedes the reliability of multimodal systems. Existing reconstruction methods face distinct bottlenecks: conventional parametric/generative models are prone to hallucinations due to over-reliance on internal…

Artificial Intelligence · Computer Science 2026-02-05 Ruiting Dai , Zheyu Wang , Haoyu Yang , Yihan Liu , Chengzhi Wang , Zekun Zhang , Zishan Huang , Jiaman Cen , Lisi Mo

Goal-oriented de novo molecule design, namely generating molecules with specific property or substructure constraints, is a crucial yet challenging task in drug discovery. Existing methods, such as Bayesian optimization and reinforcement…

Computational Engineering, Finance, and Science · Computer Science 2025-02-28 Chuanliu Fan , Ziqiang Cao , Zicheng Ma , Nan Yu , Yimin Peng , Jun Zhang , Yiqin Gao , Guohong Fu

Despite the rapid progress of large language models (LLMs), their length-controllable text generation (LCTG) ability remains below expectations, posing a major limitation for practical applications. Existing methods mainly focus on…

Computation and Language · Computer Science 2025-06-10 Peiwen Yuan , Chuyi Tan , Shaoxiong Feng , Yiwei Li , Xinglin Wang , Yueqi Zhang , Jiayi Shi , Boyuan Pan , Yao Hu , Kan Li

Large language models (LLMs) have revolutionized code generation, automating programming with remarkable efficiency. However, these advancements challenge programming skills, ethics, and assessment integrity, making the detection of…

Computation and Language · Computer Science 2025-07-18 Daniil Orel , Dilshod Azizov , Preslav Nakov

Large Language Models (LLMs) have demonstrated a powerful ability for text generation. However, achieving optimal results with a given prompt or instruction can be challenging, especially for billion-sized models. Additionally, undesired…

Computation and Language · Computer Science 2024-10-07 Lifu Tu , Semih Yavuz , Jin Qu , Jiacheng Xu , Rui Meng , Caiming Xiong , Yingbo Zhou

Effective code generation with language models hinges on two critical factors: accurately understanding the intent of the prompt and generating code that applies algorithmic reasoning to produce correct solutions capable of passing diverse…

Artificial Intelligence · Computer Science 2025-10-21 Amir Jalilifard , Anderson de Rezende Rocha , Marcos Medeiros Raimundo

Multi-objective optimization problems (MOPs) are ubiquitous in real-world applications, presenting a complex challenge of balancing multiple conflicting objectives. Traditional evolutionary algorithms (EAs), though effective, often rely on…

Neural and Evolutionary Computing · Computer Science 2024-07-29 Yuxiao Huang , Shenghao Wu , Wenjie Zhang , Jibin Wu , Liang Feng , Kay Chen Tan

Large Language Models (LLMs) have shown impressive performance across various domains, but their ability to perform molecular reasoning remains underexplored. Existing methods mostly rely on general-purpose prompting, which lacks…

Formal program specifications play a crucial role in various stages of software development. However, manually crafting formal program specifications is rather difficult, making the job time-consuming and labor-intensive. It is even more…

Software Engineering · Computer Science 2025-02-26 Lezhi Ma , Shangqing Liu , Yi Li , Xiaofei Xie , Lei Bu

Finetuning a Large Language Model (LLM) is crucial for generating results towards specific objectives. This research delves into the realm of drug optimization and introduce a novel reinforcement learning algorithm to finetune a drug…

Machine Learning · Computer Science 2025-02-12 Xuefeng Liu , Songhao Jiang , Siyu Chen , Zhuoran Yang , Yuxin Chen , Ian Foster , Rick Stevens

Large language models (LLMs) have shown impressive promise in code generation, yet their progress remains limited by the shortage of large-scale datasets that are both diverse and well-aligned with human reasoning. Most existing resources…

Machine Learning · Computer Science 2025-10-28 Amal Abed , Ivan Lukic , Jörg K. H. Franke , Frank Hutter

Despite the increasing use of large language models (LLMs) for context-grounded tasks like summarization and question-answering, understanding what makes an LLM produce a certain response is challenging. We propose Multi-Level Explanations…

Drug discovery aims to find novel compounds with specified chemical property profiles. In terms of generative modeling, the goal is to learn to sample molecules in the intersection of multiple property constraints. This task becomes…

Machine Learning · Computer Science 2020-07-06 Wengong Jin , Regina Barzilay , Tommi Jaakkola

Although Large Language Models (LLMs) exhibit remarkable adaptability across domains, these models often fall short in structured knowledge extraction tasks such as named entity recognition (NER). This paper explores an innovative,…

Computation and Language · Computer Science 2024-06-11 Yuzhao Heng , Chunyuan Deng , Yitong Li , Yue Yu , Yinghao Li , Rongzhi Zhang , Chao Zhang

Multi-aspect controllable text generation aims to control text generation in attributes from multiple aspects, making it a complex but powerful task in natural language processing. Supervised fine-tuning methods are often employed for this…

Computation and Language · Computer Science 2025-02-20 Chenyu Zhu , Yefeng Liu , Chenyang Lyu , Xue Yang , Guanhua Chen , Longyue Wang , Weihua Luo , Kaifu Zhang

Molecule generation requires satisfying multiple chemical and biological constraints while searching a large and structured chemical space. This makes it a non-binary problem, where effective models must identify non-obvious solutions under…

Computation and Language · Computer Science 2026-04-21 Wen Tao , Yiwei Wang , Peng Zhou , Bryan Hooi , Wanlong Fang , Tianle Zhang , Xiao Luo , Yuansheng Liu , Alvin Chan