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Solving optimization tasks based on functions and losses with a topological flavor is a very active, growing field of research in data science and Topological Data Analysis, with applications in non-convex optimization, statistics and…

Computational Geometry · Computer Science 2021-02-19 Mathieu Carrière , Frédéric Chazal , Marc Glisse , Yuichi Ike , Hariprasad Kannan

The extended persistence diagram is an invariant of piecewise linear functions, which is known to be stable under perturbations of functions with respect to the bottleneck distance as introduced by Cohen-Steiner, Edelsbrunner, and Harer. We…

Algebraic Topology · Mathematics 2024-07-08 Ulrich Bauer , Magnus Bakke Botnan , Benedikt Fluhr

We demonstrate that an equivalence of categories using $\varepsilon$-interleavings as a fundamental component exists between the model of persistence modules as graded modules over a polynomial ring and the model of persistence modules as…

Algebraic Topology · Mathematics 2012-10-31 Mikael Vejdemo-Johansson

Persistent homology (PH) has been widely applied to graph data to extract topological features. However, little attention has been paid to how different distance functions on a graph affect the resulting persistence barcodes and their…

Algebraic Topology · Mathematics 2026-02-17 Eunwoo Heo , Byeongchan Choi , Jae-Hun Jung

In this paper, we focus on the separability of classes with the cross-entropy loss function for classification problems by theoretically analyzing the intra-class distance and inter-class distance (i.e. the distance between any two points…

Machine Learning · Computer Science 2019-09-17 Rudrajit Das , Subhasis Chaudhuri

The problem of computing topological distance between two scalar fields based on Reeb graphs or contour trees has been studied and applied successfully to various problems in topological shape matching, data analysis, and visualization.…

Graphics · Computer Science 2023-09-12 Yashwanth Ramamurthi , Amit Chattopadhyay

Recent advances in deep learning have pushed the performances of visual saliency models way further than it has ever been. Numerous models in the literature present new ways to design neural networks, to arrange gaze pattern data, or to…

Computer Vision and Pattern Recognition · Computer Science 2019-07-05 Alexandre Bruckert , Hamed R. Tavakoli , Zhi Liu , Marc Christie , Olivier Le Meur

In recent work, generalized persistence modules have proved useful in distinguishing noise from the legitimate topological features of a data set. Algebraically, generalized persistence modules can be viewed as representations for the poset…

Algebraic Topology · Mathematics 2017-10-10 Killian Meehan , David Meyer

This paper relates parameter distance to gradient breakdown for a broad class of nonlinear compositional functions. The analysis leads to a new distance function called deep relative trust and a descent lemma for neural networks. Since the…

Machine Learning · Computer Science 2021-01-11 Jeremy Bernstein , Arash Vahdat , Yisong Yue , Ming-Yu Liu

Merge trees are a topological descriptor of a filtered space that enriches the degree zero barcode with its merge structure. The space of merge trees comes equipped with an interleaving distance $d_I$, which prompts a naive question: is the…

Algebraic Topology · Mathematics 2025-09-04 David Beers , Gillian Grindstaff

The algebraic stability theorem for $\mathbb{R}$-persistence modules is a fundamental result in topological data analysis. We present a stability theorem for $n$-dimensional rectangle decomposable persistence modules up to a constant…

Algebraic Topology · Mathematics 2020-01-22 Håvard Bakke Bjerkevik

Loss tomography has received considerable attention in recent years and a number of estimators have been proposed. Unfortunately, almost all of them are devoted to the tree topology despite the general topology is more common in practice.…

Networking and Internet Architecture · Computer Science 2011-07-21 Weiping Zhu

While machine learning (ML) architectures have evolved rapidly to account for complex data, loss functions like cross-entropy remain mostly structure-agnostic in many real-world applications. However, the `class-symmetric' nature of these…

Machine Learning · Computer Science 2026-05-28 Yasser Taha , Grégoire Montavon , Nils Körber

Almost all statistical and machine learning methods in analyzing brain networks rely on distances and loss functions, which are mostly Euclidean or matrix norms. The Euclidean or matrix distances may fail to capture underlying subtle…

Computational Geometry · Computer Science 2021-02-18 Moo K. Chung , Alexander Smith , Gary Shiu

Topological Data Analysis (TDA) is an approach to handle with big data by studying its shape. A main tool of TDA is the persistence diagram, and one can use it to compare data sets. One approach to learn on the similarity between two…

Applications · Statistics 2020-03-04 Sarit Agami

As graphical summaries for topological spaces and maps, Reeb graphs are common objects in the computer graphics or topological data analysis literature. Defining good metrics between these objects has become an important question for…

Computational Geometry · Computer Science 2017-03-09 Mathieu Carrière , Steve Oudot

The interleaving distance is a key tool for comparing merge trees, which provide topological summaries of scalar functions. In this work, we define an average merge tree for a pair of merge trees using the interleaving distance. Since such…

Computational Geometry · Computer Science 2026-03-03 Elena Farahbakhsh Touli , Ingrid Hotz , Talha Bin Masood

It is well-understood that different algorithms, training processes, and corpora produce different word embeddings. However, less is known about the relation between different embedding spaces, i.e. how far different sets of embeddings…

Computation and Language · Computer Science 2020-05-19 Xuhui Zhou , Zaixiang Zheng , Shujian Huang

Cross-entropy loss is the standard metric used to train classification models in deep learning and gradient boosting. It is well-known that this loss function fails to account for similarities between the different values of the target. We…

Machine Learning · Statistics 2022-06-16 Brian Lucena

A merge tree is a fundamental topological structure used to capture the sub-level set (and similarly, super-level set) topology in scalar data analysis. The interleaving distance is a theoretically sound, stable metric for comparing merge…

Computational Geometry · Computer Science 2026-02-13 Althaf P , Amit Chattopadhyay , Osamu Saeki