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This paper introduces Paraconsistent-Lib, an open-source, easy-to-use Python library for building PAL2v algorithms in reasoning and decision-making systems. Paraconsistent-Lib is designed as a general-purpose library of PAL2v standard…

A key hurdle is demonstrating compute resource capability with limited benchmarks. We propose workflow templates as a solution, offering adaptable designs for specific scientific applications. Our paper identifies common usage patterns for…

Distributed, Parallel, and Cluster Computing · Computer Science 2025-07-31 Gregor von Laszewski , Wesley Brewer , Sean R. Wilkinson , Andrew Shao , J. P. Fleischer , Harshad Pitkar , Christine R. Kirkpatrick , Geoffrey C. Fox

High-level programming languages such as Python are increasingly used to provide intuitive interfaces to libraries written in lower-level languages and for assembling applications from various components. This migration towards…

Distributed, Parallel, and Cluster Computing · Computer Science 2019-05-21 Yadu Babuji , Anna Woodard , Zhuozhao Li , Daniel S. Katz , Ben Clifford , Rohan Kumar , Lukasz Lacinski , Ryan Chard , Justin M. Wozniak , Ian Foster , Michael Wilde , Kyle Chard

Jupyter Notebook is the tool of choice of many data scientists in the early stages of ML workflows. The notebook format, however, has been criticized for inducing bad programming practices; indeed, researchers have already shown that…

Software Engineering · Computer Science 2022-05-25 Luigi Quaranta , Fabio Calefato , Filippo Lanubile

The prediction of material properties through electronic-structure simulations based on density-functional theory has become routinely common, thanks, in part, to the steady increase in the number and robustness of available simulation…

Exoplanet science often involves using the system parameters of real exoplanets for tasks such as simulations, fitting routines, and target selection for proposals. Several exoplanet catalogues are already well established but often lack a…

Earth and Planetary Astrophysics · Physics 2016-09-21 Ryan Varley

Difficulty replicating baselines, high computational costs, and required domain expertise create persistent barriers to clinical AI research. To address these challenges, we introduce PyHealth 2.0, an enhanced clinical deep learning toolkit…

Recent work has explored Large Language Models (LLMs) to overcome the lack of training data for Information Retrieval (IR) tasks. The generalization abilities of these models have enabled the creation of synthetic in-domain data by…

Information Retrieval · Computer Science 2023-07-11 Hugo Abonizio , Luiz Bonifacio , Vitor Jeronymo , Roberto Lotufo , Jakub Zavrel , Rodrigo Nogueira

The remote sensing community is witnessing a rapid growth of foundation models, which provide powerful embeddings for a wide range of downstream tasks. However, practical adoption and fair comparison remain challenging due to substantial…

Computer Vision and Pattern Recognition · Computer Science 2026-03-02 Dingqi Ye , Daniel Kiv , Wei Hu , Jimeng Shi , Shaowen Wang

LensKit is an open-source toolkit for building, researching, and learning about recommender systems. First released in 2010 as a Java framework, it has supported diverse published research, small-scale production deployments, and education…

Information Retrieval · Computer Science 2020-09-04 Michael D. Ekstrand

Context: A growing amount of code is written to explore and analyze data, often by data analysts who do not have a traditional background in programming, for example by journalists. Inquiry: The way such data anlysts write code is different…

Programming Languages · Computer Science 2020-02-17 Tomas Petricek

This work-in-progress research paper explores the effectiveness of tutorials in interdisciplinary learning environments, specifically focusing on bioinformatics. Tutorials are typically designed for a single audience, but our study aims to…

Computers and Society · Computer Science 2025-03-07 Hannah Kim , Sergei L. Kosakovsky Pond , Stephen MacNeil

The increasing availability of high-quality optical and near-infrared spectroscopic data, as well as advances in modelling techniques, have greatly expanded the scientific potential of spectroscopic studies. However, the software tools…

Instrumentation and Methods for Astrophysics · Physics 2025-12-23 Daniele Gasparri , Lorenzo Morelli , Umberto Battino , Jairo Méndez Abreu , Adriana de Lorenzo-Cáceres

Context: Jupyter Notebook has emerged as a versatile tool that transforms how researchers, developers, and data scientists conduct and communicate their work. As the adoption of Jupyter notebooks continues to rise, so does the interest from…

Software Engineering · Computer Science 2026-01-06 Md Saeed Siddik , Hao Li , Cor-Paul Bezemer

Software engineering (SE) and requirements engineering (RE) face a significant increase in secondary studies, particularly literature reviews (LRs), due to the ever-growing number of scientific publications. Generative artificial…

Software Engineering · Computer Science 2026-02-27 Oliver Karras , Amirreza Alasti , Lena John , Sushant Aggarwal , Yücel Celik

Ensuring the reproducibility of scientific work is crucial as it allows the consistent verification of scientific claims and facilitates the advancement of knowledge by providing a reliable foundation for future research. However,…

Software Engineering · Computer Science 2025-04-14 Lázaro Costa , Susana Barbosa , Jácome Cunha

Effective performance profiling and analysis are essential for optimizing training and inference of deep learning models, especially given the growing complexity of heterogeneous computing environments. However, existing tools often lack…

Performance · Computer Science 2024-11-06 Qidong Zhao , Hao Wu , Yuming Hao , Zilingfeng Ye , Jiajia Li , Xu Liu , Keren Zhou

Reproducibility is a core requirement of modern scientific research. For computational research, reproducibility means that code should produce the same results, even when run on different systems. A standard approach to ensuring…

Other Computer Science · Computer Science 2023-10-03 Paxton C. Fitzpatrick , Jeremy R. Manning

You have an environment, a model, and a reinforcement learning library that are designed to work together but don't. PufferLib makes them play nice. The library provides one-line environment wrappers that eliminate common compatibility…

Machine Learning · Computer Science 2024-06-21 Joseph Suarez

As modern science becomes increasingly data-intensive, the ability to analyze and visualize large-scale, complex datasets is critical to accelerating discovery. However, many domain scientists lack the programming expertise required to…

Software Engineering · Computer Science 2025-12-01 Apu Kumar Chakroborti , Yi Ding , Lipeng Wan