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Thin solids often develop elastic instabilities and subsequently complex, multiscale deformation patterns. Revealing the organizing principles of this spatial complexity has ramifications for our understanding of morphogenetic processes in…

Soft Condensed Matter · Physics 2020-02-28 Oleh Tovkach , Junbo Chen , Monica M. Ripp , Teng Zhang , Joseph D. Paulsen , Benny Davidovitch

Mechanically quenching a thin film of smectic-C liquid crystal results in the formation of a dense array of thousands of topological defects in the director field. The subsequent rapid coarsening of the film texture by the mutual…

Soft Condensed Matter · Physics 2023-04-19 Ravin A. Chowdhury , Adam A. S. Green , Cheol S. Park , Joseph E. Maclennan , Noel A. Clark

We investigate the stability and nonlinear evolution of localized electron-scale current sheets using fully kinetic, electromagnetic particle-in-cell (PIC) simulations in two and three dimensions. By varying the current-sheet thickness, we…

Plasma Physics · Physics 2026-03-31 Sushmita A. Mishra , Gurudatt Gaur

Biofilms are antibiotic-resistant bacterial aggregates that grow on moist surfaces and can trigger hospital-acquired infections. They provide a classical example in biology where the dynamics of cellular communities may be observed and…

Biological Physics · Physics 2015-02-24 D. R. Espeso , A. Carpio , B. Einarsson

We study the spatiotemporal patterns that emerge when an active nematic film is topologically constraint. These topological constraints allow to control the non-equilibrium dynamics of the active system. We consider ellipsoidal shapes for…

Soft Condensed Matter · Physics 2017-03-13 Francesco Alaimo , Christian Köhler , Axel Voigt

Biofilms are microbial collectives that occupy a diverse array of surfaces. The function and evolution of biofilms are strongly influenced by the spatial arrangement of different strains and species within them, but how spatiotemporal…

Populations and Evolution · Quantitative Biology 2018-07-04 Ricardo Martinez-Garcia , Carey D. Nadell , Raimo Hartmann , Knut Drescher , Juan A. Bonachela

Biofilms inhabit a range of environments, such as dental plaques or soil micropores, often characterized by intricate, non-even surfaces. However, the impact of surface irregularities on the population dynamics of biofilms remains elusive…

Populations and Evolution · Quantitative Biology 2023-08-31 Witold Postek , Klaudia Staskiewicz , Elin Lilja , Bartlomiej Waclaw

Formation of bacterial colonies as biofilm on the surface/interface of various objects has the potential to impact not only human health and disease but also energy and environmental considerations. Biofilms can be regarded as soft…

Fluid Dynamics · Physics 2015-09-15 Pallab Barai , Aloke Kumar , Partha P. Mukherjee

We review and compare the phenomenological aspects and physical origin of shear-localization and shear-banding in various material types, namely emulsions, suspensions, colloids, granular materials and micellar systems. It appears that…

Soft Condensed Matter · Physics 2010-02-10 Guillaume Ovarlez , Stéphane Rodts , Xavier Chateau , Philippe Coussot

The spatial organization of bacteria in dense biofilms is key to their collective behaviour, and understanding it will be important for medical and technological applications. Here we study the morphology of a compact biofilm that undergoes…

Biological Physics · Physics 2019-03-05 Xin Wang , Howard A. Stone , Ramin Golestanian

We study the dynamics of topological defects in the magnetic texture of rectangular Permalloy thin film elements during relaxation from random magnetization initial states. Our full micromagnetic simulations reveal complex defect dynamics…

Mesoscale and Nanoscale Physics · Physics 2016-10-26 Ilari Rissanen , Lasse Laurson

The persistent dynamics in systems out of equilibrium, particularly those characterized by annihilation and creation of topological defects, is known to involve complicated spatiotemporal processes and is deemed difficult to control. Here…

Soft Condensed Matter · Physics 2022-11-22 Zhi-Feng Huang , Hartmut Löwen , Axel Voigt

Morphogenesis emerges from dynamic feedback among geometry, mechanics, and chemistry; however, disentangling these contributions in living systems remains challenging. Here, we focus on the interplay between geometry and mechanics by…

From cytoskeletal networks to tissues, many biological systems behave as active materials. Their composition and stress-generation is affected by chemical reaction networks. In such systems, the coupling between mechanics and chemistry…

Biological Physics · Physics 2024-09-25 Luca Barberi , Karsten Kruse

Bacterial biofilms collectively develop distinct and ordered structures, including fibers, bundles, and branches. Often, it is unclear how these structural motifs convey specific advantages to bacterial strains under challenging conditions.…

Soft Condensed Matter · Physics 2022-11-16 Mustafa Basaran , Tevfik Can Yüce , Yusuf Ilker Yaman , Roman Vetter , Askin Kocabas

As small particles skim our airways during breathing, or our intestines during digestion, the surface epithelium is subjected to local exogenous shear that deforms hundreds to thousands of tightly interacting cells. Unlike shear…

Biological Physics · Physics 2026-01-01 Shahar Nahum , Adi Y. Elkabetz , Matan Elbaz , Liav Daraf , Yael Lavi , Lior Atia

Dynamical instabilities in fluid mechanics are responsible of a variety of important common phenomena, such as waves on the sea surface or Taylor vorteces in Couette flow. In granular media dynamical instabilities has just begun to be…

Soft Condensed Matter · Physics 2007-05-23 Massimo Pica Ciamarra , Mario Nicodemi , Antonio Coniglio

The rheological properties of biological tissues are core to processes such as cancer metastasis, wound healing and embryo development. The emergence of tissue and organ structures during morphogenesis requires the precise formation of…

Soft Condensed Matter · Physics 2026-03-10 Aidan J. Nicholas , Suzanne M. Fielding

This article is concerned with the stability and long-time dynamics of structures arising from a structureless state. The paradigm is suggested by developmental biology, where morphogenesis is thought to result from a competition between…

Pattern Formation and Solitons · Physics 2007-06-18 Hans G. Kaper , Shouhong Wang , Masoud Yari

We performed two-dimensional Molecular Dynamics simulations of cohesive disks under shear. The cohesion between the disks is added by the action of springs between very next neighbouring disks, modelling capillary forces. The geometry of…

Soft Condensed Matter · Physics 2007-05-23 N. Olivi-Tran , O. Pozo , N. Fraysse
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