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Related papers: Crossing the Functional Desert: Cascade-Driven Ass…

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Many physical, biological, and social phenomena can be described by cascades taking place on a network. Often, the activity can be empirically observed, but not the underlying network of interactions. In this paper we offer three…

Social and Information Networks · Computer Science 2017-07-24 Sushrut Ghonge , Dervis Can Vural

It is well known that life on Earth alters its environment over evolutionary and geological timescales. An important open question is whether this is a result of evolutionary optimization or a universal feature of life. In the latter case,…

Adaptation and Self-Organizing Systems · Physics 2017-04-26 Cole Mathis , Tanmoy Bhattacharya , Sara Imari Walker

The "SOS" in the title does not refer to the international distress signal, but to "solid-on-solid" (SOS) surface growth. The catastrophic cascades are those observed by Buldyrev {\it et al.} in interdependent networks, which we…

Disordered Systems and Neural Networks · Physics 2016-02-16 Peter Grassberger

Hypergraphs capture the higher-order interactions in complex systems and always admit a factor graph representation, consisting of a bipartite network of nodes and hyperedges. As hypegraphs are ubiquitous, investigating hypergraph…

Physics and Society · Physics 2024-10-08 Ginestra Bianconi , Sergey N. Dorogovtsev

Recurrence networks are complex networks, constructed from time series data, having several practical applications. Though their properties when constructed with the threshold value \epsilon chosen at or just above the percolation threshold…

Chaotic Dynamics · Physics 2016-07-19 Rinku Jacob , K. P. Harikrishnan , R. Misra , G. Ambika

Bootstrap percolation on a graph iteratively enlarges a set of occupied sites by adjoining points with at least $\theta$ occupied neighbors. The initially occupied set is random, given by a uniform product measure, and we say that spanning…

Probability · Mathematics 2015-05-14 Janko Gravner , David Sivakoff

Cooperative effects in neural networks appear because a neuron fires only if a minimal number $m$ of its inputs are excited. The multiple inputs requirement leads to a percolation model termed {\it quorum percolation}. The connectivity…

Disordered Systems and Neural Networks · Physics 2010-07-30 Or Cohen , Anna Keselman , Elisha Moses , María Rodríguez Martínez , Jordi Soriano , Tsvi Tlusty

We compare phase transition and critical phenomena of bond percolation on Euclidean lattices, nonamenable graphs, and complex networks. On a Euclidean lattice, percolation shows a phase transition between the nonpercolating phase and…

Disordered Systems and Neural Networks · Physics 2014-11-20 Takehisa Hasegawa , Tomoaki Nogawa , Koji Nemoto

The onset of life is often framed around membrane bound compartments and encoded metabolism, leaving unresolved how spatial organization arose before stable boundaries. In this context, environmental gradients are usually treated as…

Other Quantitative Biology · Quantitative Biology 2026-04-23 Arturo Tozzi

The capacity to adapt can greatly influence the success of systems that need to compensate for damaged parts, learn how to achieve robust performance in new environments, or exploit novel opportunities that originate from new technological…

Adaptation and Self-Organizing Systems · Physics 2011-12-15 James Whitacre , Axel Bender

Many complex systems respond to a continuous input of energy by an accumulation of stress over time, interrupted by sudden energy releases called avalanches. Recently, it has been pointed out that several basic features of avalanche…

Statistical Mechanics · Physics 2015-08-17 Francois P. Landes

We study the coevolutionary dynamics of network topology and social complex contagion using a threshold cascade model. Our coevolving threshold model incorporates two mechanisms: the threshold mechanism for the spreading of a minority state…

Physics and Society · Physics 2023-06-16 Byungjoon Min , Maxi San Miguel

The conceptual landscape of convection has two simple gateways: optimal function and random form. Optimal convection adjusts toward a univariate ideal called neutrality. Convection form involves elements (parcels, bubbles, drafts) whose…

Adaptation and Self-Organizing Systems · Physics 2025-04-02 Brian E. Mapes

Evidence of critical dynamics has been recently found in both experiments and models of large scale brain dynamics. The understanding of the nature and features of such critical regime is hampered by the relatively small size of the…

Disordered Systems and Neural Networks · Physics 2019-12-04 Mahdi Zarepour , Juan I. Perotti , Orlando V. Billoni , Dante R. Chialvo , Sergio A. Cannas

Spatio-temporal network dynamics is an emergent property of many complex systems which remains poorly understood. We suggest a new approach to its study based on the analysis of dynamical motifs -- small subnetworks with periodic and…

Disordered Systems and Neural Networks · Physics 2007-05-23 Valentin P. Zhigulin

We introduce a minimal model for the evolution of functional protein-interaction networks using a sequence-based mutational algorithm, and apply the model to study neutral drift in networks that yield oscillatory dynamics. Starting with a…

Molecular Networks · Quantitative Biology 2018-04-25 Md. Zulfikar Ali , Ned S. Wingreen , Ranjan Mukhopadhyay

Channel formation and branching is widely seen in physical systems where movement of fluid through a porous structure causes the spatiotemporal evolution of the medium in response to the flow, in turn causing flow pathways to evolve. We…

Synchrony is inevitable in many oscillating systems -- from the canonical alignment of two ticking grandfather clocks, to the mutual entrainment of beating flagella or spiking neurons. Yet both biological and manmade systems provide…

Adaptation and Self-Organizing Systems · Physics 2021-06-16 William Gilpin

Percolation theory has been widely used to study phase transitions in complex networked systems. It has also successfully explained several macroscopic phenomena across different fields. Yet, the existent theoretical framework for…

Physics and Society · Physics 2020-12-01 Jiarong Xie , Xiangrong Wang , Ling Feng , Jin-Hua Zhao , Yamir Moreno , Yanqing Hu

Life can be viewed as a localized chemical system that sits on, or in the basin of attraction of, a metastable dynamical attractor state that remains out of equilibrium with the environment. Such a view of life allows that new living states…

Populations and Evolution · Quantitative Biology 2018-01-08 David A. Baum