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Magnetic Resonance Imaging (MRI) is a powerful imaging technique widely used for visualizing structures within the human body and in other fields such as plant sciences. However, there is a demand to develop fast 3D-MRI reconstruction…

Image and Video Processing · Electrical Eng. & Systems 2025-12-09 Arya Bangun , Zhuo Cao , Alessio Quercia , Hanno Scharr , Elisabeth Pfaehler

Dynamic MRI suffers from limited spatiotemporal resolution due to long acquisition times. Undersampling k-space accelerates imaging but makes accurate reconstruction challenging. Supervised deep learning methods achieve impressive results…

Image and Video Processing · Electrical Eng. & Systems 2025-11-18 Yuanyuan Liu , Yuanbiao Yang , Jing Cheng , Zhuo-Xu Cui , Qingyong Zhu , Congcong Liu , Yuliang Zhu , Jingran Xu , Hairong Zheng , Dong Liang , Yanjie Zhu

We propose ReMiDi, a novel method for inferring neuronal microstructure as arbitrary 3D meshes using a differentiable diffusion Magnetic Resonance Imaging (dMRI) simulator. We first implemented in PyTorch a differentiable dMRI simulator…

Image and Video Processing · Electrical Eng. & Systems 2025-03-03 Prathamesh Pradeep Khole , Zahra Kais Petiwala , Shri Prathaa Magesh , Ehsan Mirafzali , Utkarsh Gupta , Jing-Rebecca Li , Andrada Ianus , Razvan Marinescu

Reconstructing dynamic, time-varying scenes with computed tomography (4D-CT) is a challenging and ill-posed problem common to industrial and medical settings. Existing 4D-CT reconstructions are designed for sparse sampling schemes that…

Image and Video Processing · Electrical Eng. & Systems 2021-04-26 Albert W. Reed , Hyojin Kim , Rushil Anirudh , K. Aditya Mohan , Kyle Champley , Jingu Kang , Suren Jayasuriya

We propose EMORe, an adaptive reconstruction method designed to enhance motion robustness in free-running, free-breathing self-gated 5D cardiac magnetic resonance imaging (MRI). Traditional self-gating-based motion binning for 5D MRI often…

Image and Video Processing · Electrical Eng. & Systems 2025-08-01 Syed M. Arshad , Lee C. Potter , Yingmin Liu , Christopher Crabtree , Matthew S. Tong , Rizwan Ahmad

Lumbar spine problems are ubiquitous, motivating research into targeted imaging for treatment planning and guided interventions. While high resolution and high contrast CT has been the modality of choice, MRI can capture both bone and soft…

Image and Video Processing · Electrical Eng. & Systems 2024-12-03 Yanke Wang , Yolanne Y. R. Lee , Aurelio Dolfini , Markus Reischl , Ender Konukoglu , Kyriakos Flouris

Magnetic Resonance Imaging (MRI) produces excellent soft tissue contrast, albeit it is an inherently slow imaging modality. Promising deep learning methods have recently been proposed to reconstruct accelerated MRI scans. However, existing…

Image and Video Processing · Electrical Eng. & Systems 2024-04-17 Yilmaz Korkmaz , Tolga Cukur , Vishal M. Patel

Diffusion Magnetic Resonance Imaging (dMRI) plays a critical role in studying microstructural changes in the brain. It is, therefore, widely used in clinical practice; yet progress in learning general-purpose representations from dMRI has…

Computer Vision and Pattern Recognition · Computer Science 2026-03-30 Gustavo Chau Loo Kung , Mohammad Abbasi , Camila Blank , Juze Zhang , Alan Q. Wang , Sophie Ostmeier , Akshay Chaudhari , Kilian Pohl , Ehsan Adeli

Deep learning-based MRI reconstruction models have achieved superior performance these days. Most recently, diffusion models have shown remarkable performance in image generation, in-painting, super-resolution, image editing and more. As a…

Image and Video Processing · Electrical Eng. & Systems 2024-12-06 Guoyao Shen , Mengyu Li , Chad W. Farris , Stephan Anderson , Xin Zhang

High-resolution slice-to-volume reconstruction (SVR) from multiple motion-corrupted low-resolution 2D slices constitutes a critical step in image-based diagnostics of moving subjects, such as fetal brain Magnetic Resonance Imaging (MRI).…

Cardiac cine magnetic resonance imaging (MRI) is one of the important means to assess cardiac functions and vascular abnormalities. Mitigating artifacts arising during image reconstruction and accelerating cardiac cine MRI acquisition to…

Image and Video Processing · Electrical Eng. & Systems 2024-07-03 Xiaoxiang Han , Yang Chen , Qiaohong Liu , Yiman Liu , Keyan Chen , Yuanjie Lin , Weikun Zhang

Diffusion MRI (dMRI) is sensitive to microstructural barriers, yet most existing methods either assume impermeable boundaries or estimate voxel-level parameters without recovering explicit interfaces. We present Spinverse, a…

Computer Vision and Pattern Recognition · Computer Science 2026-03-06 Prathamesh Pradeep Khole , Mario M. Brenes , Zahra Kais Petiwala , Ehsan Mirafzali , Utkarsh Gupta , Jing-Rebecca Li , Andrada Ianus , Razvan Marinescu

Diffusion Magnetic Resonance Imaging (dMRI) is a promising method to analyze the subtle changes in the tissue structure. However, the lengthy acquisition time is a major limitation in the clinical application of dMRI. Different image…

Image and Video Processing · Electrical Eng. & Systems 2024-10-28 Abhijit Baul , Nian Wang , Choyi Zhang , Leslie Ying , Yuchou Chang , Ukash Nakarmi

Conventional cardiac cine MRI methods rely on retrospective gating, which limits temporal resolution and the ability to capture continuous cardiac dynamics, particularly in patients with arrhythmias and beat-to-beat variations. To address…

Image and Video Processing · Electrical Eng. & Systems 2024-12-18 Wenqi Huang , Veronika Spieker , Siying Xu , Gastao Cruz , Claudia Prieto , Julia Schnabel , Kerstin Hammernik , Thomas Kuestner , Daniel Rueckert

Purpose: To propose a domain-conditioned and temporal-guided diffusion modeling method, termed dynamic Diffusion Modeling (dDiMo), for accelerated dynamic MRI reconstruction, enabling diffusion process to characterize spatiotemporal…

Image and Video Processing · Electrical Eng. & Systems 2025-01-17 Liping Zhang , Iris Yuwen Zhou , Sydney B. Montesi , Li Feng , Fang Liu

Due to the prolonged MRI encoding process, respiratory motion can cause undesired artifacts and image blurring, degrading image quality and limiting clinical applications in abdominal and pulmonary imaging. In this work, we develop a…

Accurate motion estimation at high acceleration factors enables rapid motion-compensated reconstruction in Magnetic Resonance Imaging (MRI) without compromising the diagnostic image quality. In this work, we introduce an attention-aware…

Image and Video Processing · Electrical Eng. & Systems 2024-04-30 Aya Ghoul , Jiazhen Pan , Andreas Lingg , Jens Kübler , Patrick Krumm , Kerstin Hammernik , Daniel Rueckert , Sergios Gatidis , Thomas Küstner

The rapid pace of innovation in biological microscopy imaging has led to large images, putting pressure on data storage and impeding efficient sharing, management, and visualization. This necessitates the development of efficient…

ECG-gated cine imaging in breath-hold enables high-quality diagnostics in most patients, arrhythmia and inability to hold breath, however, can severely corrupt outcomes. Real-time cardiac MRI in free-breathing leverages robust and faster…

Reconstructing visual stimuli from measured functional magnetic resonance imaging (fMRI) has been a meaningful and challenging task. Previous studies have successfully achieved reconstructions with structures similar to the original images,…

Computer Vision and Pattern Recognition · Computer Science 2023-03-27 Yizhuo Lu , Changde Du , Dianpeng Wang , Huiguang He