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The proper positioning of the mitotic spindle is crucial for asymmetric cell division and generating cell diversity during development. Proper position in the single-cell embryo of Caenorhabditis elegans is achieved initially by the…

Biological Physics · Physics 2015-11-10 Ehssan Nazockdast , Abtin Rahimian , Daniel Needleman , Michael Shelley

We present a theory for self-driven fluids, such as motorized cytoskeletal extracts or bacterial suspensions, that takes into account the underlying periodic duty cycle carried by the active particles of which the system is composed. We…

Soft Condensed Matter · Physics 2013-12-09 Sebastian Fürthauer , Sriram Ramaswamy

This paper addresses the amplitude and phase dynamics of a large system non-linear coupled, non-identical damped harmonic oscillators, which is based on recent research in coupled oscillation in optomechanics. Our goal is to investigate the…

Chaotic Dynamics · Physics 2015-06-23 P. Cudmore , C. A. Holmes

We explore, experimentally and theoretically, the emergence of coherent coupled oscillations and synchronization between a pair of non-Hermitian, stochastic, opto-mechanical oscillators, levitated in vacuum. Each oscillator consists of a…

We introduce a phenomenological theory for a new class of soft active fluids, with the ability to synchronise. Our theoretical framework describes the macroscopic behaviour of a collection of interacting anisotropic elements with cyclic…

Soft Condensed Matter · Physics 2015-06-16 M. Leoni , T. B. Liverpool

It is now well established that nearby beating pairs of eukaryotic flagella or cilia typically synchronize in phase. A substantial body of evidence supports the hypothesis that hydrodynamic coupling between the active filaments, combined…

Soft Condensed Matter · Physics 2016-10-12 Raymond E. Goldstein , Eric Lauga , Adriana I. Pesci , Michael R. E. Proctor

Imperfections in multimode systems lead to mode-mixing and interferences between propagating modes. Such disorder is typically characterized by a finite correlation time (in quantum evolution) or correlation length (in paraxial evolution).…

Disordered Systems and Neural Networks · Physics 2019-04-24 Yaxin Li , Doron Cohen , Tsampikos Kottos

Biochemical oscillations are prevalent in living organisms. Systems with a small number of constituents cannot sustain coherent oscillations for an indefinite time because of fluctuations in the period of oscillation. We show that the…

Statistical Mechanics · Physics 2017-06-29 Andre C Barato , Udo Seifert

Recent experiments have shown that metachronal waves (MCWs) can emerge from a chain of symmetrically beating nematodes aligned at the edge of sessile droplets. Our study, employing a coupled elastohydrodynamic model of active filaments,…

Soft Condensed Matter · Physics 2024-08-28 Narina Jung , Won Kyu Kim , Changbong Hyeon

Active diffusion of intracellular components is emerging as an important process in cell biology. This process is mediated by complex assemblies of molecular motors and cytoskeletal filaments that drive force generation in the cytoplasm and…

Cilia and flagella are actively bending slender organelles, performing functions such as motility, feeding and embryonic symmetry breaking. We review the mechanics of viscous-dominated microscale flow, including time-reversal symmetry, drag…

Quantitative Methods · Quantitative Biology 2013-09-06 Thomas D. Montenegro-Johnson , Andrew A. Smith , David J. Smith , Daniel Loghin , John R. Blake

Populations of flashing fireflies, claps of applauding audience, cells of cardiac and circadian pacemakers reach synchrony via event-triggered interactions, referred to as pulse couplings. Synchronization via pulse coupling is widely used…

Systems and Control · Computer Science 2017-10-16 Anton V. Proskurnikov , Ming Cao

Living microorganisms are capable of a tactic response to external stimuli by swimming towards or away from the stimulus source; they do so by adapting their tactic signal transduction pathways to the environment. Their self-motility thus…

Soft Condensed Matter · Physics 2016-10-12 Alexander Geiseler , Peter Hänggi , Fabio Marchesoni , Colm Mulhern , Sergey Savel'ev

Non-equilibrium processes which convert chemical energy into mechanical motion enable the motility of organisms. Bundles of inextensible filaments driven by energy transduction of molecular motors form essential components of micron-scale…

Soft Condensed Matter · Physics 2013-06-13 Abhrajit Laskar , Rajeev Singh , Somdeb Ghose , Gayathri Jayaraman , P. B. Sunil Kumar , R. Adhikari

We study the response of an ensemble of synchronized phase oscillators to an external harmonic perturbation applied to one of the oscillators. Our main goal is to relate the propagation of the perturbation signal to the structure of the…

Statistical Mechanics · Physics 2009-11-10 D. H. Zanette

Carpets of actively bending cilia represent arrays of biological oscillators that can exhibit self-organized metachronal synchronization in the form of traveling waves of cilia phase. This metachronal coordination supposedly enhances fluid…

Biological Physics · Physics 2022-01-11 Anton Solovev , Benjamin M. Friedrich

We develop a formalism to analyze the behaviour of pulse--coupled identical phase oscillators with a specific attention devoted to the onset of partial synchronization. The method, which allows describing the dynamics both at the…

Disordered Systems and Neural Networks · Physics 2007-05-23 P. K. Mohanty , Antonio Politi

Calcium (Ca2+) signalling is one of the most important mechanisms of information propagation in the body. In embryogenesis the interplay between Ca2+ signalling and mechanical forces is critical to the healthy development of an embryo but…

Quantitative Methods · Quantitative Biology 2019-01-23 Katerina Kaouri , Philip K. Maini , Paris Skourides , Neophytos Christodoulou , S. Jonathan Chapman

The mechanism of synchronization of oscillations in two identical coupled flow systems has beenstudied. The time (past the coupling onset) during which a synchronous oscillation regime is establisheddepends on the oscillation phase…

Chaotic Dynamics · Physics 2015-06-26 A. A. Koronovskii , A. E. Hramov , I. A. Khromova

We investigated the locking behaviors of coupled limit-cycle oscillators with phase and amplitude dynamics. We focused on how the dynamics are affected by inhomogeneous coupling strength and by angular and radial shifts in the coupling…

Dynamical Systems · Mathematics 2021-01-19 Jae Hyung Woo , Christopher J. Honey , Joon-Young Moon
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