Related papers: Random knotting in very long off-lattice self-avoi…
We probe the character of knotting in open, confined polymers, assigning knot types to open curves by identifying their projections as virtual knots. In this sense, virtual knots are transitional, lying in between classical knot types,…
The lectures review the state of affairs in modern branch of mathematical physics called probabilistic topology. In particular we consider the following problems: (i) We estimate the probability of a trivial knot formation on the lattice…
In this paper we use artificial neural networks to predict and help compute the values of certain knot invariants. In particular, we show that neural networks are able to predict when a knot is quasipositive with a high degree of accuracy.…
There are 352.2 million prime knots in the 3-sphere with at most 19 crossings. We study which of these knots are slice, in both the smooth and topological categories. While no algorithm is known for deciding whether a given knot is slice in…
The unknotting number of a positive braid with n strands and k intersections is known to be equal to (k-n+1)/2. We consider Lorenz knots (which are positive braids) and, using a different method, find their unknotting numbers in terms of…
We study two simple modifications of self-avoiding polygons. Osculating polygons are a super-set in which we allow the perimeter of the polygon to touch at a vertex. Neighbour-avoiding polygons are only allowed to have nearest neighbour…
We describe an algorithm to find ribbon disks for alternating knots, and the results of a computer implementation of this algorithm. The algorithm is underlain by a slice link obstruction coming from Donaldson's diagonalisation theorem. It…
This paper contains the first knot polynomials which can distinguish the orientations of classical knots and which make no excplicit use of the knot group. But they make extensive use of the meridian and of the longitude in a geometric way.…
In multivariate spline regression, the number and locations of knots influence the performance and interpretability significantly. However, due to non-differentiability and varying dimensions, there is no desirable frequentist method to…
In thermally fluctuating long linear polymeric chain in solution, the ends come from time to time into a direct contact or a close vicinity of each other. At such an instance, the chain can be regarded as a closed one and thus will form a…
We study random knots, which we define as a triple of random periodic functions (where a random function is a random trigonometric series, \[f(\theta) = \sum_{k=1}^\infty a_k \cos (k \theta) +b_k (\sin k \theta),\] with $a_k, b_k$ are…
A self-avoiding polygon is a lattice polygon consisting of a closed self-avoiding walk on a square lattice. Surprisingly little is known rigorously about the enumeration of self-avoiding polygons, although there are numerous conjectures…
The role of the topology and its relation with the geometry of biopolymers under different physical conditions is a nontrivial and interesting problem. Aiming at understanding this issue for a related simpler system, we use Monte Carlo…
We construct new knot polynomials. Let $V$ be the standard solid torus in 3-space and let $pr$ be its standard projection onto an annulus. Let $M$ be the space of all smooth oriented knots in $V$ such that the restriction of $pr$ is an…
We consider the problem of an inextensible but flexible fiber advected by a steady chaotic flow, and ask the simple question whether the fiber can spontaneously knot itself. Using a 1D Cosserat model, a simple local viscous drag model and…
We model the typical behavior of knots and links using grid diagrams. Links are ubiquitous in the sciences, and their "normal" or "typical" behavior is of significant importance in understanding situations such as the topological state of…
We propose a gauge model of quantum electrodynamics (QED) and its nonabelian generalization from which we derive knot invariants such as the Jones polynomial. Our approach is inspired by the work of Witten who derived knot invariants from…
Knot-based, sparse Gaussian processes have enjoyed considerable success as scalable approximations to full Gaussian processes. Problems can occur, however, when knot selection is done by optimizing the marginal likelihood. For example, the…
It is known that any open necklace with beads of $t$ types in which the number of beads of each type is divisible by $k$, can be partitioned by at most $(k-1)t$ cuts into intervals that can be distributed into $k$ collections, each…
We find a power law for the number of knot-monomers with an exponent $0.39 \pm0.13$ in agreement with previous simulations. For the average size of a knot we also obtain a power law $N_m=2.56\cdot N^{0.20\pm0.04}$. We further present data…