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The Mapper algorithm is a popular tool for visualization and data exploration in topological data analysis. We investigate an inverse problem for the Mapper algorithm: Given a dataset $X$ and a graph $G$, does there exist a set of Mapper…

We investigate novel random graph embeddings that can be computed in expected polynomial time and that are able to distinguish all non-isomorphic graphs in expectation. Previous graph embeddings have limited expressiveness and either cannot…

Machine Learning · Computer Science 2023-08-25 Pascal Welke , Maximilian Thiessen , Fabian Jogl , Thomas Gärtner

In recent years many algorithms have been developed for finding patterns in graphs and networks. A disadvantage of these algorithms is that they use subgraph isomorphism to determine the support of a graph pattern; subgraph isomorphism is a…

Data Structures and Algorithms · Computer Science 2015-03-19 Anton Dries , Siegfried Nijssen

This work presents a two-stage neural architecture for learning and refining structural correspondences between graphs. First, we use localized node embeddings computed by a graph neural network to obtain an initial ranking of soft…

Machine Learning · Computer Science 2020-01-28 Matthias Fey , Jan E. Lenssen , Christopher Morris , Jonathan Masci , Nils M. Kriege

Large graphs can be found in a wide array of scientific fields ranging from sociology and biology to scientometrics and computer science. Their analysis is by no means a trivial task due to their sheer size and complex structure. Such…

Social and Information Networks · Computer Science 2017-02-24 Georgios Drakopoulos , Stavros Kontopoulos , Christos Makris , Vasileios Megalooikonomou

We examine ordered graphs, defined as graphs with linearly ordered vertices, from the perspective of homomorphisms (and colorings) and their complexities. We demonstrate the corresponding computational and parameterized complexities, along…

Computational Complexity · Computer Science 2025-12-01 Michal Čertík , Andreas Emil Feldmann , Jaroslav Nešetřil , Paweł Rzążewski

It is well known that the spectrum and the Smith normal form of a matrix can be computed in polynomial time. Thus, it is interesting to explore how good are these parameters for distinguishing graphs. This is relevant since it is related to…

Combinatorics · Mathematics 2023-09-28 Carlos A. Alfaro , Ralihe R. Villagrán , Octavio Zapata

We automatically verify the crucial steps in the original proof of correctness of an algorithm which, given a geometric graph satisfying certain additional properties removes edges in a systematic way for producing a connected graph in…

Logic in Computer Science · Computer Science 2023-11-30 Lucas Böltz , Viorica Sofronie-Stokkermans , Hannes Frey

We consider complete graphs with edge weights and/or node weights taking values in some set. In the first part of this paper, we show that a large number of graphs are completely determined, up to isomorphism, by the distribution of their…

Combinatorics · Mathematics 2007-10-11 Mireille Boutin , Gregor Kemper

Graph alignment refers to the problem of finding a bijective mapping across vertices of two graphs such that, if two nodes are connected in the first graph, their images are connected in the second graph. This problem arises in many fields…

Data Structures and Algorithms · Computer Science 2017-09-06 Soheil Feizi , Gerald Quon , Mariana Recamonde-Mendoza , Muriel Medard , Manolis Kellis , Ali Jadbabaie

A geometric graph is a graph whose vertex set is a set of points in the plane and whose edge set contains straight-line segments. A matching in a graph is a subset of edges of the graph with no shared vertices. A matching is called perfect…

Computational Geometry · Computer Science 2016-10-21 Ahmad Biniaz

In this paper we introduce a novel polynomial-time algorithm to compute graph invariants based on the modified random walk idea on graphs. However not proved to be a full graph invariant by now, our method gives the right answer for the…

Data Structures and Algorithms · Computer Science 2015-08-24 Alexander Gamkrelidze , Gunter Hotz , Levan Varamashvili

This paper provides a new similarity detection algorithm. Given an input set of multi-dimensional data points, where each data point is assumed to be multi-dimensional, and an additional reference data point for similarity finding, the…

Artificial Intelligence · Computer Science 2017-07-12 Yariv Aizenbud , Amir Averbuch , Gil Shabat , Guy Ziv

Learning faithful graph representations as sets of vertex embeddings has become a fundamental intermediary step in a wide range of machine learning applications. The quality of the embeddings is usually determined by how well the geometry…

Machine Learning · Computer Science 2021-05-13 Federico López , Beatrice Pozzetti , Steve Trettel , Anna Wienhard

For graph classification tasks, many traditional kernel methods focus on measuring the similarity between graphs. These methods have achieved great success on resolving graph isomorphism problems. However, in some classification problems,…

Machine Learning · Computer Science 2021-02-18 Jianming Huang , Hiroyuki Kasai

Fabricating experimental pictures in research work is a serious academic misconduct, which should better be detected in the reviewing process. However, due to large number of submissions, the detection whether a picture is fabricated or…

Computer Vision and Pattern Recognition · Computer Science 2020-02-11 Binrui Shen , Qiang Niu , Shengxin Zhu

Classical graph matching aims to find a node correspondence between two unlabeled graphs of known topologies. This problem has a wide range of applications, from matching identities in social networks to identifying similar biological…

Signal Processing · Electrical Eng. & Systems 2024-10-28 Hang Liu , Anna Scaglione , Hoi-To Wai

The isomorphism problem means to decide if two given finite-dimensional simple algebras over the same centre are isomorphic and, if so, to construct an isomorphism between them. A solution to this problem has applications in computational…

Rings and Algebras · Mathematics 2007-05-23 Timo Hanke

Graph alignment aims at finding the vertex correspondence between two correlated graphs, a task that frequently occurs in graph mining applications such as social network analysis. Attributed graph alignment is a variant of graph alignment,…

Data Structures and Algorithms · Computer Science 2024-03-13 Ziao Wang , Ning Zhang , Weina Wang , Lele Wang

Many applications, ranging from natural to social sciences, rely on graphlet analysis for the intuitive and meaningful characterization of networks employing micro-level structures as building blocks. However, it has not been thoroughly…

Social and Information Networks · Computer Science 2023-06-06 Colin Cleveland , Chin-Yen Lee , Shen-Fu Tsai , Wei-Hsuan Yu , Hsuan-Wei Lee