English
Related papers

Related papers: Data-driven Reduction of Transfer Operators for Pa…

200 papers

A major current challenge poses the systematic construction of coarse-grained models that are dynamically consistent, and, moreover, might be used for systems driven out of thermal equilibrium. Here we present a novel prescription that…

Statistical Mechanics · Physics 2016-08-05 Fabian Knoch , Thomas Speck

While existing mathematical descriptions can accurately account for phenomena at microscopic scales (e.g. molecular dynamics), these are often high-dimensional, stochastic and their applicability over macroscopic time scales of physical…

Machine Learning · Statistics 2016-09-08 P. S. Koutsourelakis , Elias Bilionis

In this paper we propose a framework inspired by interacting particle physics and devised to perform clustering on multidimensional datasets. To this end, any given dataset is modeled as an interacting particle system, under the assumption…

Statistical Mechanics · Physics 2012-07-26 Giuliano Armano , Marco Alberto Javarone

Multiscale systems are ubiquitous in science and technology, but are notoriously challenging to simulate as short spatiotemporal scales must be appropriately linked to emergent bulk physics. When expensive high-dimensional dynamical systems…

Machine Learning · Computer Science 2025-12-30 Quercus Hernandez , Max Win , Thomas C. O'Connor , Paulo E. Arratia , Nathaniel Trask

Coarse-graining techniques play a central role in reducing the complexity of stochastic models, and are typically characterised by a mapping which projects the full state of the system onto a smaller set of variables which captures the…

Probability · Mathematics 2023-09-28 Bastian Hilder , Upanshu Sharma

Viewing Transformers as interacting particle systems, we describe the geometry of learned representations when the weights are not time dependent. We show that particles, representing tokens, tend to cluster toward particular limiting…

Machine Learning · Computer Science 2024-02-14 Borjan Geshkovski , Cyril Letrouit , Yury Polyanskiy , Philippe Rigollet

In this work, we present a transformer-based framework for predicting future pedestrian states based on clustered historical trajectory data. In previous studies, researchers propose enhancing pedestrian trajectory predictions by using…

Computer Vision and Pattern Recognition · Computer Science 2024-08-29 Kleio Fragkedaki , Frank J. Jiang , Karl H. Johansson , Jonas Mårtensson

A tensor provides a concise way to codify the interdependence of complex data. Treating a tensor as a d-way array, each entry records the interaction between the different indices. Clustering provides a way to parse the complexity of the…

Machine Learning · Computer Science 2020-05-26 Derek DeSantis , Phillip J. Wolfram , Katrina Bennett , Boian Alexandrov

Data-based discovery of effective, coarse-grained (CG) models of high-dimensional dynamical systems presents a unique challenge in computational physics and particularly in the context of multiscale problems. The present paper offers a…

Computational Physics · Physics 2020-08-26 Sebastian Kaltenbach , Phaedon-Stelios Koutsourelakis

The proposed distributed dynamic clustering algorithm enables to group agents based on their pre-selected feature states. The clusters are determined by comparing the distance of the agents' current feature states with average estimates of…

Systems and Control · Electrical Eng. & Systems 2024-12-20 Runfan Zhang , Branislav Hredzak

This work presents a systematic methodology for describing the transient dynamics of coarse-grained molecular systems inferred from all-atom simulated data. We suggest Langevin-type dynamics where the coarse-grained interaction potential…

Numerical Analysis · Mathematics 2023-09-22 G. Baxevani , V. Harmandaris , E. Kalligiannaki , I. Tsantili

Analog quantum computation offers a route to machine learning using controllable physical dynamics as a computational resource. However, many existing approaches rely on task-specific protocols or observables that are difficult to access…

Quantum Physics · Physics 2026-05-12 Shmuel Lorber , Yonatan Dubi

Transformers have emerged as a powerful neural network architecture capable of tackling a wide range of learning tasks. In this work, we provide a theoretical analysis of their ability to automatically extract structure from data in an…

Machine Learning · Statistics 2025-10-29 Rodrigo Maulen-Soto , Pierre Marion , Claire Boyer

In this paper we propose an adaptive approach for clustering and visualization of data by an orthogonalization process. Starting with the data points being represented by a Markov process using the diffusion map framework, the method…

Machine Learning · Statistics 2022-07-26 Martin Ryner , Johan Karlsson

A new model that describes adsorption and clustering of particles on a surface is introduced. A {\it clustering} transition is found which separates between a phase of weakly correlated particle distributions and a phase of strongly…

Statistical Mechanics · Physics 2009-10-31 Ofer Biham , Ofer Malcai , Daniel A. Lidar , David Avnir

Creating low dimensional representations of a high dimensional data set is an important component in many machine learning applications. How to cluster data using their low dimensional embedded space is still a challenging problem in…

Machine Learning · Computer Science 2023-03-27 Zahra Moslehi , Abdolreza Mirzaei , Mehran Safayani

Motivated by theoretical advancements in dimensionality reduction techniques we use a recent model, called Block Markov Chains, to conduct a practical study of clustering in real-world sequential data. Clustering algorithms for Block Markov…

Machine Learning · Computer Science 2022-10-05 Alexander Van Werde , Albert Senen-Cerda , Gianluca Kosmella , Jaron Sanders

Graphs and networks play an important role in modeling and analyzing complex interconnected systems such as transportation networks, integrated circuits, power grids, citation graphs, and biological and artificial neural networks. Graph…

Machine Learning · Statistics 2024-02-15 Stefan Klus , Maia Trower

Developing accurate and efficient coarse-grained representations of proteins is crucial for understanding their folding, function, and interactions over extended timescales. Our methodology involves simulating proteins with molecular…

Biomolecules · Quantitative Biology 2023-10-11 Carles Navarro , Maciej Majewski , Gianni de Fabritiis

We discuss and generalize multi-particle entanglement based on statistical correlations using Ursell-Mayer type of cluster coefficients. Cluster coefficients are used to distinguish different, independent entangled systems as well as those…

Quantum Physics · Physics 2009-11-15 Atul Kumar , Mangala Sunder Krishnan