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Sampling one or more effective solutions from large search spaces is a recurring idea in machine learning, and sequential optimization has become a popular solution. Typical examples include data summarization, sample mining for predictive…

Current popular methods for Magnetic Resonance Fingerprint (MRF) recovery are bottlenecked by the heavy computations of a matched-filtering step due to the growing size and complexity of the fingerprint dictionaries in multi-parametric…

Computer Vision and Pattern Recognition · Computer Science 2018-10-05 Mohammad Golbabaee , Zhouye Chen , Yves Wiaux , Mike Davies

Computing fixed-radius near-neighbor graphs is an important first step for many data analysis algorithms. Near-neighbor graphs connect points that are close under some metric, endowing point clouds with a combinatorial structure. As…

Distributed, Parallel, and Cluster Computing · Computer Science 2025-10-17 Gabriel Raulet , Dmitriy Morozov , Aydin Buluc , Katherine Yelick

Acquiring plausible pathways on high-dimensional structural distributions is beneficial in several domains. For example, in the drug discovery field, a protein conformational pathway, i.e. a highly probable sequence of protein structural…

Quantitative Methods · Quantitative Biology 2025-06-04 Ziyad Oulhaj , Yoshiyuki Ishii , Kento Ohga , Kimihiro Yamazaki , Mutsuyo Wada , Yuhei Umeda , Takashi Kato , Yuichiro Wada , Hiroaki Kurihara

In algorithms for finite metric spaces, it is common to assume that the distance between two points can be computed in constant time, and complexity bounds are expressed only in terms of the number of points of the metric space. We…

Computational Geometry · Computer Science 2019-01-28 Michael Kerber , Arnur Nigmetov

Targeting simulations on parallel hardware architectures, this paper presents computational kernels for efficient computations in mortar finite element methods. Mortar methods enable a variationally consistent imposition of coupling…

Numerical Analysis · Mathematics 2023-08-25 Matthias Mayr , Alexander Popp

Classical unsupervised learning methods like clustering and linear dimensionality reduction parametrize large-scale geometry when it is discrete or linear, while more modern methods from manifold learning find low dimensional representation…

Machine Learning · Computer Science 2025-09-23 Luis Scoccola , Uzu Lim , Heather A. Harrington

Many automated manufacturing processes rely on industrial robot arms to move process-specific tools along workpiece surfaces. In applications like grinding, sanding, spray painting, or inspection, they need to cover a workpiece fully while…

Robotics · Computer Science 2026-02-09 Robert Wilbrandt , Rüdiger Dillmann

The advent of highly accurate protein structure prediction methods has fueled an exponential expansion of the protein structure database. Consequently, there is a rising demand for rapid and precise structural homolog search. Traditional…

Biomolecules · Quantitative Biology 2023-12-01 Yuan Liu , Hong-Bin Shen

Persistence diagrams, combining geometry and topology for an effective shape description used in pattern recognition, have already proven to be an effective tool for shape representation with respect to a certainfiltering function.…

Algebraic Topology · Mathematics 2018-12-26 Alessia Angeli , Massimo Ferri , Ivan Tomba

Modern day computing increasingly relies on specialization to satiate growing performance and efficiency requirements. A core challenge in designing such specialized hardware architectures is how to perform mapping space search, i.e.,…

Machine Learning · Computer Science 2021-03-03 Kartik Hegde , Po-An Tsai , Sitao Huang , Vikas Chandra , Angshuman Parashar , Christopher W. Fletcher

Volumetric maps are widely used in robotics due to their desirable properties in applications such as path planning, exploration, and manipulation. Constant advances in mapping technologies are needed to keep up with the improvements in…

Robotics · Computer Science 2023-06-05 Victor Reijgwart , Cesar Cadena , Roland Siegwart , Lionel Ott

With the recent surge in big data analytics for hyper-dimensional data there is a renewed interest in dimensionality reduction techniques for machine learning applications. In order for these methods to improve performance gains and…

Machine Learning · Computer Science 2023-01-20 J. Derek Tucker , Matthew T. Martinez , Jose M. Laborde

Current proposed solutions for the high dimensionality of the MRF reconstruction problem rely on a linear compression step to reduce the matching computations and boost the efficiency of fast but non-scalable searching schemes such as the…

Quantitative Methods · Quantitative Biology 2018-09-10 Mohammad Golbabaee , Zhouye Chen , Yves Wiaux , Mike E. Davies

Automatic cover detection -- the task of finding in an audio database all the covers of one or several query tracks -- has long been seen as a challenging theoretical problem in the MIR community and as an acute practical problem for…

Sound · Computer Science 2019-07-05 Guillaume Doras , Geoffroy Peeters

High-Throughput materials discovery involves the rapid synthesis, measurement, and characterization of many different but structurally-related materials. A key problem in materials discovery, the phase map identification problem, involves…

Tree graphs are routinely used in statistics. When estimating a Bayesian model with a tree component, sampling the posterior remains a core difficulty. Existing Markov chain Monte Carlo methods tend to rely on local moves, often leading to…

Methodology · Statistics 2025-02-05 Edric Tam , David B. Dunson , Leo L. Duan

Mapper graphs are widely used tools in topological data analysis and visualization. They can be understood as discrete approximations of Reeb graphs, providing insight into the shape and connectivity of complex data. Given a…

Computational Geometry · Computer Science 2026-04-17 Erin Wolf Chambers , Ishika Ghosh , Elizabeth Munch , Sarah Percival , Bei Wang

Weight pruning is an effective model compression technique to tackle the challenges of achieving real-time deep neural network (DNN) inference on mobile devices. However, prior pruning schemes have limited application scenarios due to…

Machine Learning · Computer Science 2022-03-29 Yifan Gong , Geng Yuan , Zheng Zhan , Wei Niu , Zhengang Li , Pu Zhao , Yuxuan Cai , Sijia Liu , Bin Ren , Xue Lin , Xulong Tang , Yanzhi Wang

Time-varying coverage, namely sweep coverage is a recent development in the area of wireless sensor networks, where a small number of mobile sensors sweep or monitor comparatively large number of locations periodically. In this article we…

Distributed, Parallel, and Cluster Computing · Computer Science 2017-04-11 Barun Gorain , Partha Sarathi Mandal