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We investigate single molecule magnet transistors (SMMTs) with ligands that support transport resonances. We find the lowest unoccupied molecular orbitals of Mn12-benzoate SMMs (with and without thiol or methyl-sulfide termination) to be on…

Mesoscale and Nanoscale Physics · Physics 2011-11-23 Fatemeh Rostamzadeh Renani , George Kirczenow

Living things benefit from exquisite molecular sensitivity in many of their key processes, including DNA replication, transcription and translation, chemical sensing, and morphogenesis. At thermodynamic equilibrium, the basic biophysical…

Statistical Mechanics · Physics 2021-12-16 Jeremy A. Owen , Jordan M. Horowitz

Small regulatory RNAs (sRNAs) are short non-coding RNAs in bacteria capable of post-transcriptional regulation. sRNAs have recently gained attention as tools in basic and applied sciences for example to fine-tune genetic circuits or…

Quantitative Methods · Quantitative Biology 2024-04-18 Michel Brueck , Bork A. Berghoff , Daniel Schindler

Research towards the production of renewable chemicals for fuel and energy industries has found lignin valorization as key. With a high carbon content and aromaticity, a fine-tuning of the depolymerization process is required to convert…

2-Ethyhexyl nitrate (2-EHN) is a major additive of fuel which is used to comply with the cetane number of diesel. Because of its wide use and possible accidental release, 2-EHN is a potential pollutant of the environment. In this study,…

Biomolecules · Quantitative Biology 2009-04-24 Elodie Nicolau , L. Kerhoas , Martine Lettere , Yves Jouanneau , Rémy Marchal

Recent genome and transcriptome sequencing projects have unveiled a plethora of highly structured RNA molecules as central mediators of cellular function. Single molecule Forster Resonance Energy Transfer (smFRET) is a powerful tool for…

Synthetic antiferromagnetic (SAF) skyrmions are nanoscale composite textures that exhibit high-speed, Hall-free current-driven motion and recently demonstrated self-propulsion. These remarkable properties rely on the stability of the SAF…

Mesoscale and Nanoscale Physics · Physics 2025-12-22 Rai M. Menezes , Clecio C. de Souza Silva

Aims. Resistance to targeted therapies remains a major challenge in EGFR-mutant non-small cell lung cancer (NSCLC). Here, we describe a novel metabolic adaptation in osimertinib-resistant cells characterized by elevated acetate levels and…

Charge transfer (CT) is a fundamental and ubiquitous mechanism in biology, physics and chemistry. Here, we evidence that CT dynamics can be altered by multi-layered hyperbolic metamaterial (HMM) substrates. Taking triphenylene:perylene…

Mesoscale and Nanoscale Physics · Physics 2017-06-23 KJ Lee , Y Xiao , JH Woo , E Kim , D Kreher , A-J Attias , F Mathevet , J-C Ribierre , JW Wu , P Andre

Structural Maintenance Complexes (SMC) are energy consuming motors that are important in folding the genome by loop extrusion (LE) in all stages of the cell cycle. Single molecule magnetic tweezer pulling experiments have revealed that…

Soft Condensed Matter · Physics 2026-05-07 Atreya Dey , Guang Shi , Ryota Takaki , D. Thirumalai

The Standard Model Effective Field Theory (SMEFT) is the parametrization chosen to interpret many modern measurements. We have recently discussed, building on the work of other groups, that its overall framework can be experimentally…

High Energy Physics - Phenomenology · Physics 2023-01-11 Alexandre Salas-Bernardez , Juan J. Sanz-Cillero , Felipe J. Llanes-Estrada , Raquel Gomez-Ambrosio

The metabolic network plays a crucial role in regulating bacterial metabolism and growth, but it is subject to inherent molecular stochasticity. Previous studies have utilized flux balance analysis and the maximum entropy method to predict…

Molecular Networks · Quantitative Biology 2024-01-12 Shaohua Guan , Zhichao Zhang , Zihan Zhang , Hualin Shi

Quantum embedding based on the (one-electron reduced) density matrix is revisited by means of the unitary Householder transformation. While being exact and equivalent to (but formally simpler than) density matrix embedding theory (DMET) in…

Strongly Correlated Electrons · Physics 2021-07-12 Sajanthan Sekaran , Masahisa Tsuchiizu , Matthieu Saubanère , Emmanuel Fromager

A large number of studies have shown the existence of metabolic covalent modifications in different molecular structures, able to store biochemical information that is not encoded by the DNA. Some of these covalent mark patterns can be…

Subcellular Processes · Quantitative Biology 2015-01-12 Ildefonso M. De la Fuente

Motile bacteria can migrate along chemical gradients in a process known as chemotaxis. When exposed to uniform environmental stress, Escherichia coli cells coordinate their chemotactic responses to form millimeter-sized condensates…

Biological Physics · Physics 2025-05-02 Nir Livne , Ady Vaknin , Oded Agam

Establishing symmetry-protected topological (SPT) phases with interactions in chemically realistic systems remains an open challenge. We show that a single, synthetically plausible organic one-dimensional chain, tunable via chemical…

Strongly Correlated Electrons · Physics 2025-12-19 Khalid N. Anindya , Hong Guo

We apply the hybrid Projectionless Dynamic Theory (hybrid PDT) formulation of the Elastically Collective Nonlinear Langevin Equation (ECNLE) activated dynamics approach to study dense fluids of sticky spheres with short range attractions.…

Soft Condensed Matter · Physics 2024-08-22 Anoop Mutneja , Kenneth S Schweizer

Detailed-balance limits for transition-metal dichalcogenide (TMD) solar cells have been reported, but existing TMD-specific limits do not simultaneously resolve thickness-dependent optics, carrier multiplication (CM), hot-carrier (HC)…

Applied Physics · Physics 2026-05-04 Seungwoo Lee

The predominant structural protein in vertebrates is collagen, which plays a key role in extracellular matrix and connective tissue mechanics. Despite its prevalence and physical importance in biology, the mechanical properties of molecular…

Biological Physics · Physics 2018-11-14 Naghmeh Rezaei , Aaron Lyons , Nancy R. Forde

The spontaneous activity pattern of cortical neurons in dissociated culture is characterized by burst firing that is highly synchronized among a wide population of cells. The degree of synchrony, however, is excessively higher than that in…

Neurons and Cognition · Quantitative Biology 2020-06-12 Takuma Sumi , Hideaki Yamamoto , Ayumi Hirano-Iwata