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Subgraph GNNs enhance message-passing GNNs expressivity by representing graphs as sets of subgraphs, demonstrating impressive performance across various tasks. However, their scalability is hindered by the need to process large numbers of…

Machine Learning · Computer Science 2025-06-02 Guy Bar-Shalom , Yam Eitan , Fabrizio Frasca , Haggai Maron

This paper presents a novel meta algorithm, Partition-Merge (PM), which takes existing centralized algorithms for graph computation and makes them distributed and faster. In a nutshell, PM divides the graph into small subgraphs using our…

Data Structures and Algorithms · Computer Science 2013-09-25 Vincent Blondel , Kyomin Jung , Pushmeet Kohli , Devavrat Shah

Partitioning large networks into stable clusters of synchronized nodes is a challenging task. Recent approaches based on spectral analysis can provide exact results on specific dynamics but remain unfeasible for very large networks.…

Physics and Society · Physics 2026-01-23 Massimo Ostilli

We propose a novel optimization-based approach to embedding heterogeneous high-dimensional data characterized by a graph. The goal is to create a two-dimensional visualization of the graph structure such that edge-crossings are minimized…

Optimization and Control · Mathematics 2012-10-09 Amina Shabbeer , Cagri Ozcaglar , Kristin P. Bennett

We introduce the computational problem of graphlet transform of a sparse large graph. Graphlets are fundamental topology elements of all graphs/networks. They can be used as coding elements to encode graph-topological information at…

Social and Information Networks · Computer Science 2020-09-02 Dimitris Floros , Nikos Pitsianis , Xiaobai Sun

Modern graph or network datasets often contain rich structure that goes beyond simple pairwise connections between nodes. This calls for complex representations that can capture, for instance, edges of different types as well as so-called…

Social and Information Networks · Computer Science 2020-02-19 Ilya Amburg , Nate Veldt , Austin R. Benson

We propose a novel method to optimize the structure of factor graphs for graph-based inference. As an example inference task, we consider symbol detection on linear inter-symbol interference channels. The factor graph framework has the…

Information Theory · Computer Science 2023-06-02 Lukas Rapp , Luca Schmid , Andrej Rode , Laurent Schmalen

Multicast remains a fundamental mechanism for scalable content distribution, yet existing approaches face critical limitations. Traditional multicast trees suffer from path redundancy and inefficient utilization of network resources, while…

Networking and Internet Architecture · Computer Science 2025-10-27 Tomas Lestayo Martinez , Manuel Fernandez Veiega Veiga

We introduce graphcodes, a novel multi-scale summary of the topological properties of a dataset that is based on the well-established theory of persistent homology. Graphcodes handle datasets that are filtered along two real-valued scale…

Algebraic Topology · Mathematics 2024-05-24 Michael Kerber , Florian Russold

Exploring and detecting community structures hold significant importance in genetics, social sciences, neuroscience, and finance. Especially in graphical models, community detection can encourage the exploration of sets of variables with…

Machine Learning · Statistics 2024-05-17 Dapeng Shi , Tiandong Wang , Zhiliang Ying

Graph condensation aims to reduce the size of a large-scale graph dataset by synthesizing a compact counterpart without sacrificing the performance of Graph Neural Networks (GNNs) trained on it, which has shed light on reducing the…

Machine Learning · Computer Science 2024-06-19 Yuchen Zhang , Tianle Zhang , Kai Wang , Ziyao Guo , Yuxuan Liang , Xavier Bresson , Wei Jin , Yang You

Hypergraph partitioning is an NP-hard problem that occurs in many computer science applications where it is necessary to reduce large problems into a number of smaller, computationally tractable sub-problems. Current techniques use a…

Neural and Evolutionary Computing · Computer Science 2022-12-06 Richard J. Preen , Jim Smith

Hypergraphs are vital in modelling data with higher-order relations containing more than two entities, gaining prominence in machine learning and signal processing. Many hypergraph neural networks leverage message passing over hypergraph…

Machine Learning · Computer Science 2025-08-09 Bohan Tang , Siheng Chen , Xiaowen Dong

Massive graphs, such as online social networks and communication networks, have become common today. To efficiently analyze such large graphs, many distributed graph computing systems have been developed. These systems employ the "think…

Distributed, Parallel, and Cluster Computing · Computer Science 2015-03-03 Da Yan , James Cheng , Yi Lu , Wilfred Ng

The problem of accelerating drug discovery relies heavily on automatic tools to optimize precursor molecules to afford them with better biochemical properties. Our work in this paper substantially extends prior state-of-the-art on…

Chemical Physics · Physics 2019-10-22 Wengong Jin , Regina Barzilay , Tommi Jaakkola

Hypergraphs effectively model higher-order relationships in natural phenomena, capturing complex interactions beyond pairwise connections. We introduce a novel hypergraph message passing framework inspired by interacting particle systems,…

Machine Learning · Computer Science 2025-05-27 Yixuan Ma , Kai Yi , Pietro Lio , Shi Jin , Yu Guang Wang

This paper presents a new approach for assembling graph neural networks based on framelet transforms. The latter provides a multi-scale representation for graph-structured data. We decompose an input graph into low-pass and high-pass…

Machine Learning · Computer Science 2021-06-22 Xuebin Zheng , Bingxin Zhou , Junbin Gao , Yu Guang Wang , Pietro Lio , Ming Li , Guido Montufar

Graph compression is a data analysis technique that consists in the replacement of parts of a graph by more general structural patterns in order to reduce its description length. It notably provides interesting exploration tools for the…

Data Structures and Algorithms · Computer Science 2018-07-19 Robin Lamarche-Perrin

In this paper, we revisit a well-known distributed projected subgradient algorithm which aims to minimize a sum of cost functions with a common set constraint. In contrast to most of existing results, weight matrices of the time-varying…

Optimization and Control · Mathematics 2021-04-29 Weijian Li , Zihan Chen , Youcheng Lou , Yiguang Hong

I report on the development of a novel statistical mechanical formalism for the analysis of random graphs with many short loops, and processes on such graphs. The graphs are defined via maximum entropy ensembles, in which both the degrees…

Disordered Systems and Neural Networks · Physics 2016-05-04 A C C Coolen
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