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Related papers: SCP: Accelerating Discovery with a Global Web of A…

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ESCAPE (European Science Cluster of Astronomy and Particle physics ESFRI research infrastructures) is a project to set up a cluster of ESFRI (European Strategy Forum on Research Infrastructures) facilities for astronomy, astroparticle and…

Instrumentation and Methods for Astrophysics · Physics 2023-02-23 S. Bertocco , D. Goz , S. A. Russo , M. Moliaro , G. Taffoni

Computing has long served as a cornerstone of scientific discovery. Recently, a paradigm shift has emerged with the rise of large language models (LLMs), introducing autonomous systems, referred to as agents, that accelerate discovery…

Orchestrated multi-agent systems represent the next stage in the evolution of artificial intelligence, where autonomous agents collaborate through structured coordination and communication to achieve complex, shared objectives. This paper…

Multiagent Systems · Computer Science 2026-01-21 Apoorva Adimulam , Rajesh Gupta , Sumit Kumar

The rapid evolution of Large Language Model (LLM)-based autonomous agents is reshaping the digital landscape toward an emerging Agentic Web, where increasingly specialized agents must collaborate to accomplish complex tasks. However,…

Networking and Internet Architecture · Computer Science 2026-02-25 Xiaohang Nie , Zihan Guo , Youliang Chen , Yuanjian Zhou , Weinan Zhang

LLMs' capabilities are enhanced by using function calls to integrate various data sources or API results into the context window. Typical tools include search, web crawlers, maps, financial data, file systems, and browser usage, etc.…

Artificial Intelligence · Computer Science 2025-08-12 Shiqing Fan , Xichen Ding , Liang Zhang , Linjian Mo

Despite significant advancements in general-purpose AI agents, several challenges still hinder their practical application in real-world scenarios. First, the limited planning capabilities of Large Language Models (LLM) restrict AI agents…

Artificial Intelligence · Computer Science 2025-01-17 Anbang Ye , Qianran Ma , Jia Chen , Muqi Li , Tong Li , Fujiao Liu , Siqi Mai , Meichen Lu , Haitao Bao , Yang You

As AI agents increasingly perform economic tasks on behalf of humans, a fundamental tension arises between agent autonomy and human control over financial assets. We present the Agent Economic Sovereignty Protocol (AESP), a layered protocol…

Cryptography and Security · Computer Science 2026-03-03 Jian Sheng Wang

The increased adoption of the Model Context Protocol (MCP) for AI Agents necessitates robust security for Enterprise integrations. This paper introduces the MCP Gateway to simplify self-hosted MCP server integration. The proposed…

Cryptography and Security · Computer Science 2025-04-29 Ivo Brett

Recent breakthroughs in large language models (LLMs) exemplified by the impressive mathematical and scientific reasoning capabilities of the o1 model have spotlighted the critical importance of high-quality training data in advancing LLM…

Computation and Language · Computer Science 2025-08-26 Dakuan Lu , Xiaoyu Tan , Rui Xu , Tianchu Yao , Chao Qu , Wei Chu , Yinghui Xu , Yuan Qi

Bioinformatics web servers are critical resources in modern biomedical research, facilitating interactive exploration of datasets through custom-built interfaces with rich visualization capabilities. However, this human-centric design…

Other Quantitative Biology · Quantitative Biology 2026-02-25 Matthias Flotho , Ian Ferenc Diks , Philipp Flotho , Leidy-Alejandra G. Molano , Pascal Hirsch , Andreas Keller

This paper provides an in-depth technical analysis and implementation methodology of the open-source Agent-to-Agent (A2A) protocol developed by Google and the Model Context Protocol (MCP) introduced by Anthropic. While the evolution of…

Artificial Intelligence · Computer Science 2025-10-03 Cheonsu Jeong

3D object detection using LiDAR point clouds is a fundamental task in the fields of computer vision, robotics, and autonomous driving. However, existing 3D detectors heavily rely on annotated datasets, which are both time-consuming and…

Computer Vision and Pattern Recognition · Computer Science 2023-09-13 Yiming Shan , Yan Xia , Yuhong Chen , Daniel Cremers

When users work with AI agents, they form conscious or subconscious expectations of them. Meeting user expectations is crucial for such agents to engage in successful interactions and teaming. However, users may form expectations of an…

Artificial Intelligence · Computer Science 2025-09-26 Akkamahadevi Hanni , Jonathan Montaño , Yu Zhang

We introduce the STATION, an open-world multi-agent environment for autonomous scientific discovery. The Station simulates a complete scientific ecosystem, where agents can engage in long scientific journeys that include reading papers from…

Artificial Intelligence · Computer Science 2025-12-02 Stephen Chung , Wenyu Du

Single-cell proteomics (SCP) is transforming our understanding of biological complexity by shifting from bulk proteomics, where signals are averaged over thousands of cells, to the proteome analysis of individual cells. This granular…

Quantitative Methods · Quantitative Biology 2025-04-01 Amanda Momenzadeh , Jesse G. Meyer

Recent advancements in Large Language Models (LLMs) and the introduction of the Model Context Protocol (MCP) have significantly expanded LLM agents' capability to interact dynamically with external tools and APIs. However, existing tool…

Computation and Language · Computer Science 2025-05-13 Elias Lumer , Anmol Gulati , Vamse Kumar Subbiah , Pradeep Honaganahalli Basavaraju , James A. Burke

The Model Context Protocol (MCP) aims to create a standard for how Large Language Models use tools. However, most current research focuses on selecting tools from an existing pool. A more fundamental, yet largely overlooked, problem is how…

Software Engineering · Computer Science 2026-02-12 Chaoqian Ouyang , Ling Yue , Shimin Di , Libin Zheng , Linan Yue , Shaowu Pan , Jian Yin , Min-Ling Zhang

Agentic systems, in which diverse agents cooperate to tackle challenging problems, are exploding in popularity in the AI community. However, existing agentic frameworks take a relatively narrow view of agents, apply a centralized model, and…

Multiagent Systems · Computer Science 2026-01-30 Alok Kamatar , J. Gregory Pauloski , Yadu Babuji , Ryan Chard , Mansi Sakarvadia , Daniel Babnigg , Kyle Chard , Ian Foster

The Model Context Protocol (MCP) has unified the interface between Large Language Models (LLMs) and external tools, yet a fundamental gap remains in how agents conceptualize the environments within which they operate. Current paradigms are…

Artificial Intelligence · Computer Science 2026-05-12 Giridhar Ganapavarapu , Dhaval Patel

The Model Context Protocol (MCP) is rapidly emerging as the middleware for LLM-based applications, offering a standardized interface for tool integration. However, its built-in security mechanisms are minimal: while schemas and declarations…

Cryptography and Security · Computer Science 2025-12-04 Biwei Yan , Yue Zhang , Minghui Xu , Hao Wu , Yechao Zhang , Kun Li , Guoming Zhang , Xiuzhen Cheng
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